Project name: query_structure

Status: done

Started: 2026-03-17 01:07:54
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAGHQDYGVSVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTYYMGPDVYGRSEYPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:45)
Show buried residues

Minimal score value
-3.0796
Maximal score value
1.7504
Average score
-0.6352
Total score value
-64.1545

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.1890
2 S A 0.1046
3 D A -0.7339
4 V A -0.4471
5 P A 0.0000
6 R A -2.6457
7 D A -3.0796
8 L A 0.0000
9 E A -2.0443
10 V A 0.1006
11 V A 1.5442
12 A A 0.9042
13 A A 0.2963
14 T A -0.3430
15 P A -1.1267
16 T A -1.0027
17 S A -0.5277
18 L A 0.0000
19 L A 0.7589
20 I A 0.0000
21 S A -1.0276
22 W A 0.0000
23 D A -2.8843
24 A A -1.9004
25 G A -1.6368
26 H A -1.6033
27 Q A -1.5802
28 D A -0.7142
29 Y A 0.6378
30 G A 0.1300
31 V A -0.2647
32 S A -0.8533
33 V A -1.3612
34 R A -2.0594
35 Y A -1.0482
36 Y A 0.0000
37 R A -0.7479
38 I A 0.0000
39 T A -0.6280
40 Y A -0.4356
41 G A 0.0000
42 E A -1.7080
43 T A -1.3499
44 G A -1.2823
45 G A -1.4695
46 N A -1.5709
47 S A -0.9319
48 P A -0.4270
49 V A 0.2541
50 Q A -1.2152
51 E A -1.8041
52 F A -0.6953
53 T A -0.2038
54 V A -0.4999
55 P A -1.0282
56 G A -1.3271
57 S A -1.2759
58 K A -1.9355
59 S A -1.2294
60 T A -0.6464
61 A A 0.0000
62 T A 0.2602
63 I A 0.0000
64 S A -0.6578
65 G A -1.0301
66 L A 0.0000
67 K A -2.4070
68 P A -1.6975
69 G A -1.5080
70 V A -1.5362
71 D A -2.3101
72 Y A 0.0000
73 T A -0.8365
74 I A 0.0000
75 T A 0.0000
76 V A 0.0000
77 Y A 0.0395
78 A A 0.0000
79 V A 0.0000
80 T A 0.0000
81 Y A 0.0564
82 Y A 1.3867
83 M A 1.7212
84 G A 0.0000
85 P A -0.2039
86 D A -0.6631
87 V A 1.4720
88 Y A 1.7504
89 G A 0.2394
90 R A -1.4774
91 S A -1.0058
92 E A -0.9630
93 Y A -0.1573
94 P A -0.1925
95 I A -0.1117
96 S A -0.6532
97 I A -0.7417
98 N A -1.7880
99 Y A -1.5694
100 R A -2.6320
101 T A -1.5617
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Laboratory of Theory of Biopolymers 2018