| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAGHQDYGVSVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTYYMGPDVYGRSEYPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.1890 | |
| 2 | S | A | 0.1046 | |
| 3 | D | A | -0.7339 | |
| 4 | V | A | -0.4471 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.6457 | |
| 7 | D | A | -3.0796 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.0443 | |
| 10 | V | A | 0.1006 | |
| 11 | V | A | 1.5442 | |
| 12 | A | A | 0.9042 | |
| 13 | A | A | 0.2963 | |
| 14 | T | A | -0.3430 | |
| 15 | P | A | -1.1267 | |
| 16 | T | A | -1.0027 | |
| 17 | S | A | -0.5277 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7589 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.0276 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.8843 | |
| 24 | A | A | -1.9004 | |
| 25 | G | A | -1.6368 | |
| 26 | H | A | -1.6033 | |
| 27 | Q | A | -1.5802 | |
| 28 | D | A | -0.7142 | |
| 29 | Y | A | 0.6378 | |
| 30 | G | A | 0.1300 | |
| 31 | V | A | -0.2647 | |
| 32 | S | A | -0.8533 | |
| 33 | V | A | -1.3612 | |
| 34 | R | A | -2.0594 | |
| 35 | Y | A | -1.0482 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.7479 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | -0.6280 | |
| 40 | Y | A | -0.4356 | |
| 41 | G | A | 0.0000 | |
| 42 | E | A | -1.7080 | |
| 43 | T | A | -1.3499 | |
| 44 | G | A | -1.2823 | |
| 45 | G | A | -1.4695 | |
| 46 | N | A | -1.5709 | |
| 47 | S | A | -0.9319 | |
| 48 | P | A | -0.4270 | |
| 49 | V | A | 0.2541 | |
| 50 | Q | A | -1.2152 | |
| 51 | E | A | -1.8041 | |
| 52 | F | A | -0.6953 | |
| 53 | T | A | -0.2038 | |
| 54 | V | A | -0.4999 | |
| 55 | P | A | -1.0282 | |
| 56 | G | A | -1.3271 | |
| 57 | S | A | -1.2759 | |
| 58 | K | A | -1.9355 | |
| 59 | S | A | -1.2294 | |
| 60 | T | A | -0.6464 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | 0.2602 | |
| 63 | I | A | 0.0000 | |
| 64 | S | A | -0.6578 | |
| 65 | G | A | -1.0301 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.4070 | |
| 68 | P | A | -1.6975 | |
| 69 | G | A | -1.5080 | |
| 70 | V | A | -1.5362 | |
| 71 | D | A | -2.3101 | |
| 72 | Y | A | 0.0000 | |
| 73 | T | A | -0.8365 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | 0.0395 | |
| 78 | A | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | T | A | 0.0000 | |
| 81 | Y | A | 0.0564 | |
| 82 | Y | A | 1.3867 | |
| 83 | M | A | 1.7212 | |
| 84 | G | A | 0.0000 | |
| 85 | P | A | -0.2039 | |
| 86 | D | A | -0.6631 | |
| 87 | V | A | 1.4720 | |
| 88 | Y | A | 1.7504 | |
| 89 | G | A | 0.2394 | |
| 90 | R | A | -1.4774 | |
| 91 | S | A | -1.0058 | |
| 92 | E | A | -0.9630 | |
| 93 | Y | A | -0.1573 | |
| 94 | P | A | -0.1925 | |
| 95 | I | A | -0.1117 | |
| 96 | S | A | -0.6532 | |
| 97 | I | A | -0.7417 | |
| 98 | N | A | -1.7880 | |
| 99 | Y | A | -1.5694 | |
| 100 | R | A | -2.6320 | |
| 101 | T | A | -1.5617 |