| Chain sequence(s) |
A: ATVHQKTAEGDKTCPDGYEHTCGCIGGCGCKRSACIGALCCQASLGGWLSDGETYTYEFHVDTW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.5999 | |
| 2 | T | A | 0.1750 | |
| 3 | V | A | 0.4923 | |
| 4 | H | A | -0.9612 | |
| 5 | Q | A | -1.6168 | |
| 6 | K | A | -2.1716 | |
| 7 | T | A | -0.9374 | |
| 8 | A | A | -1.1291 | |
| 9 | E | A | -2.1746 | |
| 10 | G | A | -1.8923 | |
| 11 | D | A | -3.1045 | |
| 12 | K | A | -3.2532 | |
| 13 | T | A | -1.9451 | |
| 14 | C | A | -1.7401 | |
| 15 | P | A | -1.5097 | |
| 16 | D | A | -2.4096 | |
| 17 | G | A | -1.9363 | |
| 18 | Y | A | -1.9449 | |
| 19 | E | A | -2.6971 | |
| 20 | H | A | -1.5896 | |
| 21 | T | A | -0.4616 | |
| 22 | C | A | 0.8257 | |
| 23 | G | A | 0.5484 | |
| 24 | C | A | 0.0000 | |
| 25 | I | A | 2.0287 | |
| 26 | G | A | 0.7645 | |
| 27 | G | A | 0.4742 | |
| 28 | C | A | 0.1694 | |
| 29 | G | A | 0.0000 | |
| 30 | C | A | 0.0000 | |
| 31 | K | A | -0.7143 | |
| 32 | R | A | -1.6105 | |
| 33 | S | A | -1.2431 | |
| 34 | A | A | -0.1397 | |
| 35 | C | A | 0.5349 | |
| 36 | I | A | 1.7330 | |
| 37 | G | A | 1.0130 | |
| 38 | A | A | 1.1477 | |
| 39 | L | A | 1.6255 | |
| 40 | C | A | 0.0000 | |
| 41 | C | A | 0.0000 | |
| 42 | Q | A | 0.3111 | |
| 43 | A | A | 0.1435 | |
| 44 | S | A | 0.0188 | |
| 45 | L | A | 0.2316 | |
| 46 | G | A | -0.2684 | |
| 47 | G | A | 0.0000 | |
| 48 | W | A | 0.3330 | |
| 49 | L | A | 0.4814 | |
| 50 | S | A | -1.2396 | |
| 51 | D | A | -2.1932 | |
| 52 | G | A | -2.0236 | |
| 53 | E | A | -2.9524 | |
| 54 | T | A | -1.9336 | |
| 55 | Y | A | -0.3583 | |
| 56 | T | A | -0.0729 | |
| 57 | Y | A | 0.2205 | |
| 58 | E | A | -1.2211 | |
| 59 | F | A | 0.2803 | |
| 60 | H | A | -0.3703 | |
| 61 | V | A | 0.4303 | |
| 62 | D | A | -0.3426 | |
| 63 | T | A | 0.2247 | |
| 64 | W | A | 1.1644 |