| Chain sequence(s) |
A: MFVNQHLCGSHLVEALYLVCGERGFFYTKPTRDADDRGIVEQCCTSICSLYQLENYCNRGKREARFVNQHLCGSHLVEALYLVCGERGFFYTKPTRDADDRGIVEQCCTSICSLYQLENYCNRGKREARFVNQHLCGSHLVEALYLVCGERGFFYTKPTRDADDRGIVEQCCTSICSLYQLENYCN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:42)
[INFO] Main: Simulation completed successfully. (00:04:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | M | A | 1.9793 | |
| 1 | F | A | 2.7741 | |
| 2 | V | A | 2.2223 | |
| 3 | N | A | 0.3518 | |
| 4 | Q | A | 0.4716 | |
| 5 | H | A | 0.1032 | |
| 6 | L | A | 0.6177 | |
| 7 | C | A | 0.1749 | |
| 8 | G | A | 0.0000 | |
| 9 | S | A | -1.0049 | |
| 10 | H | A | -1.1911 | |
| 11 | L | A | 0.0000 | |
| 12 | V | A | -0.0534 | |
| 13 | E | A | -1.1048 | |
| 14 | A | A | -0.0091 | |
| 15 | L | A | 0.0000 | |
| 16 | Y | A | 0.8008 | |
| 17 | L | A | 1.6576 | |
| 18 | V | A | 1.0113 | |
| 19 | C | A | 0.0000 | |
| 20 | G | A | 0.2145 | |
| 21 | E | A | -1.0482 | |
| 22 | R | A | -1.1033 | |
| 23 | G | A | 0.0000 | |
| 24 | F | A | -0.2970 | |
| 25 | F | A | 0.2864 | |
| 26 | Y | A | 0.0231 | |
| 27 | T | A | -0.8212 | |
| 28 | K | A | -2.0023 | |
| 29 | P | A | -1.7965 | |
| 30 | T | A | 0.0000 | |
| 31 | R | A | -3.0952 | |
| 32 | D | A | -2.1908 | |
| 33 | A | A | -1.8914 | |
| 34 | D | A | -2.7846 | |
| 35 | D | A | 0.0000 | |
| 36 | R | A | -2.9071 | |
| 37 | G | A | -2.4086 | |
| 38 | I | A | 0.0000 | |
| 39 | V | A | -0.6555 | |
| 40 | E | A | -0.8952 | |
| 41 | Q | A | -0.1834 | |
| 42 | C | A | 0.0000 | |
| 43 | C | A | 0.3918 | |
| 44 | T | A | 0.2503 | |
| 45 | S | A | 0.7166 | |
| 46 | I | A | 1.9475 | |
| 47 | C | A | 1.1760 | |
| 48 | S | A | 0.7998 | |
| 49 | L | A | 1.3144 | |
| 50 | Y | A | 0.9555 | |
| 51 | Q | A | 0.1506 | |
| 52 | L | A | 0.0000 | |
| 53 | E | A | -0.2343 | |
| 54 | N | A | -0.8625 | |
| 55 | Y | A | 0.0000 | |
| 56 | C | A | 0.0000 | |
| 57 | N | A | 0.0000 | |
| 58 | R | A | -1.7173 | |
| 59 | G | A | -1.9935 | |
| 60 | K | A | -3.0326 | |
| 61 | R | A | -2.8422 | |
| 62 | E | A | -1.9353 | |
| 63 | A | A | -1.0075 | |
| 64 | R | A | -1.0479 | |
| 65 | F | A | 0.2506 | |
| 66 | V | A | 1.1657 | |
| 67 | N | A | 0.3239 | |
| 68 | Q | A | -0.0985 | |
| 69 | H | A | -0.3755 | |
| 70 | L | A | 0.0000 | |
| 71 | C | A | -0.0375 | |
| 72 | G | A | -0.4947 | |
| 73 | S | A | -0.8922 | |
| 74 | H | A | -1.4847 | |
| 75 | L | A | 0.0000 | |
| 76 | V | A | 0.4491 | |
| 77 | E | A | -0.8688 | |
| 78 | A | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | 1.1475 | |
| 81 | L | A | 1.6975 | |
| 82 | V | A | 1.0011 | |
| 83 | C | A | 0.0000 | |
| 84 | G | A | 0.1283 | |
| 85 | E | A | -0.3766 | |
| 86 | R | A | -0.8561 | |
| 87 | G | A | -0.8078 | |
| 88 | F | A | 0.0000 | |
| 89 | F | A | 0.0019 | |
| 90 | Y | A | 0.4121 | |
| 91 | T | A | -0.0888 | |
| 92 | K | A | -1.3497 | |
| 93 | P | A | -1.3302 | |
| 94 | T | A | -2.2937 | |
| 95 | R | A | -3.5785 | |
| 96 | D | A | -3.6549 | |
| 97 | A | A | -2.6060 | |
| 98 | D | A | -2.6182 | |
| 99 | D | A | -3.2700 | |
| 100 | R | A | -3.3918 | |
| 101 | G | A | -2.2055 | |
| 102 | I | A | 0.0000 | |
| 103 | V | A | -0.7199 | |
| 104 | E | A | -1.9658 | |
| 105 | Q | A | -1.0069 | |
| 106 | C | A | 0.0000 | |
| 107 | C | A | -0.0869 | |
| 108 | T | A | -0.3594 | |
| 109 | S | A | -0.2511 | |
| 110 | I | A | 0.4951 | |
| 111 | C | A | 0.0000 | |
| 112 | S | A | 0.0000 | |
| 113 | L | A | 1.4502 | |
| 114 | Y | A | 1.4206 | |
| 115 | Q | A | 0.3466 | |
| 116 | L | A | 0.0000 | |
| 117 | E | A | 0.3088 | |
| 118 | N | A | -0.7071 | |
| 119 | Y | A | -0.0064 | |
| 120 | C | A | 0.0000 | |
| 121 | N | A | -1.4705 | |
| 122 | R | A | -1.8957 | |
| 123 | G | A | -1.9467 | |
| 124 | K | A | -3.0647 | |
| 125 | R | A | -3.2408 | |
| 126 | E | A | -2.0586 | |
| 127 | A | A | -0.9694 | |
| 128 | R | A | 0.0000 | |
| 129 | F | A | 0.2749 | |
| 130 | V | A | 0.6960 | |
| 131 | N | A | 0.0000 | |
| 132 | Q | A | -0.2532 | |
| 133 | H | A | -0.7599 | |
| 134 | L | A | 0.0000 | |
| 135 | C | A | -0.4057 | |
| 136 | G | A | -0.5269 | |
| 137 | S | A | -0.8774 | |
| 138 | H | A | -1.3618 | |
| 139 | L | A | 0.0000 | |
| 140 | V | A | 0.3986 | |
| 141 | E | A | -0.7473 | |
| 142 | A | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | Y | A | 1.0348 | |
| 145 | L | A | 1.7346 | |
| 146 | V | A | 0.8259 | |
| 147 | C | A | -0.1600 | |
| 148 | G | A | -0.2616 | |
| 149 | E | A | -1.6695 | |
| 150 | R | A | -2.2821 | |
| 151 | G | A | -1.5936 | |
| 152 | F | A | -1.0674 | |
| 153 | F | A | -0.7325 | |
| 154 | Y | A | -0.3648 | |
| 155 | T | A | -0.8577 | |
| 156 | K | A | -1.7864 | |
| 157 | P | A | -1.7073 | |
| 158 | T | A | -2.1152 | |
| 159 | R | A | -3.6272 | |
| 160 | D | A | -3.6551 | |
| 161 | A | A | -2.5614 | |
| 162 | D | A | -2.5918 | |
| 163 | D | A | -3.3584 | |
| 164 | R | A | -3.2784 | |
| 165 | G | A | -2.2040 | |
| 166 | I | A | 0.0000 | |
| 167 | V | A | -1.0553 | |
| 168 | E | A | -2.2148 | |
| 169 | Q | A | -1.5226 | |
| 170 | C | A | 0.0000 | |
| 171 | C | A | -0.7383 | |
| 172 | T | A | -0.6661 | |
| 173 | S | A | -0.6288 | |
| 174 | I | A | -0.1107 | |
| 175 | C | A | 0.0000 | |
| 176 | S | A | 0.0000 | |
| 177 | L | A | 0.7748 | |
| 178 | Y | A | 0.5998 | |
| 179 | Q | A | -0.7157 | |
| 180 | L | A | 0.0000 | |
| 181 | E | A | -0.8002 | |
| 182 | N | A | -1.7190 | |
| 183 | Y | A | -0.8222 | |
| 184 | C | A | 0.0000 | |
| 185 | N | A | -1.6828 |