| Chain sequence(s) |
A: NADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLILASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:21)
[INFO] Main: Simulation completed successfully. (00:02:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -2.0568 | |
| 2 | A | A | -1.4084 | |
| 3 | D | A | -2.4530 | |
| 4 | E | A | -2.5371 | |
| 5 | W | A | -0.7070 | |
| 6 | M | A | -0.9276 | |
| 7 | T | A | -1.7064 | |
| 8 | T | A | -1.3378 | |
| 9 | F | A | -1.1110 | |
| 10 | R | A | -2.5871 | |
| 11 | E | A | -2.6372 | |
| 12 | N | A | -1.7326 | |
| 13 | I | A | -1.1094 | |
| 14 | A | A | -1.6186 | |
| 15 | Q | A | -2.2998 | |
| 16 | T | A | 0.0000 | |
| 17 | W | A | -0.3347 | |
| 18 | Q | A | -1.7428 | |
| 19 | Q | A | -2.2572 | |
| 20 | P | A | -1.5797 | |
| 21 | E | A | -1.8602 | |
| 22 | H | A | -0.2677 | |
| 23 | Y | A | 1.7170 | |
| 24 | D | A | 0.0000 | |
| 25 | L | A | 2.3438 | |
| 26 | Y | A | 0.0000 | |
| 27 | I | A | 1.6107 | |
| 28 | P | A | 0.0000 | |
| 29 | A | A | 0.4629 | |
| 30 | I | A | 0.5606 | |
| 31 | T | A | 0.2017 | |
| 32 | W | A | 0.4052 | |
| 33 | H | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | R | A | -0.5420 | |
| 36 | F | A | 1.1943 | |
| 37 | A | A | 0.0000 | |
| 38 | Y | A | 0.0000 | |
| 39 | D | A | -2.3609 | |
| 40 | K | A | -3.8699 | |
| 41 | E | A | -4.0731 | |
| 42 | K | A | -3.4818 | |
| 43 | T | A | 0.0000 | |
| 44 | D | A | -4.0196 | |
| 45 | R | A | -3.3462 | |
| 46 | Y | A | -1.8241 | |
| 47 | N | A | -1.2694 | |
| 48 | E | A | -1.1289 | |
| 49 | R | A | -1.5398 | |
| 50 | P | A | 0.0000 | |
| 51 | W | A | 0.6510 | |
| 52 | G | A | 0.3108 | |
| 53 | G | A | 0.7139 | |
| 54 | G | A | 1.0727 | |
| 55 | F | A | 2.3141 | |
| 56 | G | A | 0.0000 | |
| 57 | L | A | 0.7926 | |
| 58 | S | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | W | A | -1.0439 | |
| 61 | D | A | -1.9510 | |
| 62 | E | A | -2.7373 | |
| 63 | K | A | -2.6164 | |
| 64 | G | A | -1.5670 | |
| 65 | N | A | -0.6567 | |
| 66 | W | A | 0.0000 | |
| 67 | H | A | 0.0000 | |
| 68 | G | A | 0.0000 | |
| 69 | L | A | 1.0266 | |
| 70 | Y | A | 0.9895 | |
| 71 | A | A | 0.8498 | |
| 72 | M | A | 0.0000 | |
| 73 | A | A | 0.4820 | |
| 74 | F | A | 0.0000 | |
| 75 | K | A | -0.4316 | |
| 76 | D | A | 0.0000 | |
| 77 | S | A | -0.4649 | |
| 78 | W | A | -0.0800 | |
| 79 | N | A | -0.9254 | |
| 80 | K | A | -1.0174 | |
| 81 | W | A | 0.2822 | |
| 82 | E | A | -0.1796 | |
| 83 | P | A | 0.0988 | |
| 84 | I | A | 0.4615 | |
| 85 | A | A | 0.6023 | |
| 86 | G | A | 0.5413 | |
| 87 | Y | A | 0.0000 | |
| 88 | G | A | 0.0000 | |
| 89 | W | A | 0.8646 | |
| 90 | E | A | 0.0000 | |
| 91 | S | A | 0.4704 | |
| 92 | T | A | 0.4545 | |
| 93 | W | A | 0.5551 | |
| 94 | R | A | -0.6410 | |
| 95 | P | A | -0.0671 | |
| 96 | L | A | 0.5679 | |
| 97 | A | A | -0.2656 | |
| 98 | D | A | -1.2075 | |
| 99 | E | A | -2.0722 | |
| 100 | N | A | -1.1975 | |
| 101 | F | A | 0.2483 | |
| 102 | H | A | 0.0000 | |
| 103 | L | A | 1.5850 | |
| 104 | G | A | 0.0000 | |
| 105 | L | A | 2.2256 | |
| 106 | G | A | 1.3843 | |
| 107 | F | A | 1.8393 | |
| 108 | T | A | 0.0000 | |
| 109 | A | A | 1.1571 | |
| 110 | G | A | 0.8360 | |
| 111 | V | A | 1.3001 | |
| 112 | T | A | 0.7611 | |
| 113 | A | A | 0.6202 | |
| 114 | R | A | -0.2027 | |
| 115 | D | A | -0.9539 | |
| 116 | N | A | -0.8537 | |
| 117 | W | A | 0.3002 | |
| 118 | N | A | -0.5444 | |
| 119 | Y | A | 0.7896 | |
| 120 | I | A | 1.9272 | |
| 121 | P | A | 1.1326 | |
| 122 | L | A | 1.0668 | |
| 123 | P | A | 0.8331 | |
| 124 | V | A | 1.4508 | |
| 125 | L | A | 2.2769 | |
| 126 | L | A | 2.0008 | |
| 127 | I | A | 2.5383 | |
| 128 | L | A | 0.0000 | |
| 129 | A | A | 1.5449 | |
| 130 | S | A | 1.3415 | |
| 131 | V | A | 2.2318 | |
| 132 | G | A | 0.0000 | |
| 133 | Y | A | 1.2483 | |
| 134 | G | A | 0.0756 | |
| 135 | P | A | 0.8881 | |
| 136 | V | A | 1.9466 | |
| 137 | T | A | 0.0000 | |
| 138 | F | A | 1.9133 | |
| 139 | Q | A | 0.0000 | |
| 140 | M | A | 1.1545 | |
| 141 | T | A | 0.0000 | |
| 142 | Y | A | 1.1993 | |
| 143 | I | A | 1.0048 | |
| 144 | P | A | 0.0883 | |
| 145 | G | A | -0.5380 | |
| 146 | T | A | -0.2125 | |
| 147 | Y | A | 0.6656 | |
| 148 | N | A | -0.7088 | |
| 149 | N | A | -1.0991 | |
| 150 | G | A | -0.4539 | |
| 151 | N | A | 0.1098 | |
| 152 | V | A | 0.3047 | |
| 153 | Y | A | 1.0573 | |
| 154 | F | A | 0.0000 | |
| 155 | A | A | 0.0000 | |
| 156 | W | A | 0.0000 | |
| 157 | M | A | 1.3730 | |
| 158 | R | A | 0.0000 | |
| 159 | F | A | 2.1636 | |
| 160 | Q | A | 1.6059 | |
| 161 | F | A | 2.2166 |