Project name: 59eff1b8a869e1d

Status: done

Started: 2025-08-06 17:16:43
Settings
Chain sequence(s) A: WKRKRWASKRRRWK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-4.2605
Maximal score value
-0.304
Average score
-2.6769
Total score value
-37.4771

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 W A -0.3040
2 K A -2.7830
3 R A -3.4830
4 K A -3.6477
5 R A -3.0791
6 W A -1.1881
7 A A -1.4452
8 S A -2.4678
9 K A -3.4231
10 R A -3.9983
11 R A -4.2605
12 R A -3.4861
13 W A -1.6437
14 K A -2.2675
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Laboratory of Theory of Biopolymers 2018