Project name: P2F3

Status: done

Started: 2026-06-05 02:46:02
Settings
Chain sequence(s) H: EVQLQQSGAELVKPGASVKLSCKASGYTFTNYWMHWVKQRPGRGLEWIGRIDPDNGDTKNNEKFTSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARRAYYSKNALDYWGQGTSVTVSS
L: DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVETDDVATYYCQQSNKDPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:15)
Show buried residues

Minimal score value
-3.093
Maximal score value
1.564
Average score
-0.7156
Total score value
-165.3107

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1597
2 V H -1.4111
3 Q H -2.1349
4 L H 0.0000
5 Q H -2.1877
6 Q H 0.0000
7 S H -0.9822
8 G H -0.6883
9 A H 0.0527
11 E H 0.0825
12 L H 1.0643
13 V H -0.0537
14 K H -1.6308
15 P H -1.3179
16 G H -1.0804
17 A H -0.8480
18 S H -0.8770
19 V H -0.5811
20 K H -1.1571
21 L H 0.0000
22 S H -0.6691
23 C H 0.0000
24 K H -1.7624
25 A H 0.0000
26 S H -1.3988
27 G H -1.2461
28 Y H -0.6712
29 T H -0.5008
30 F H 0.0000
35 T H -1.6258
36 N H -1.0927
37 Y H 0.0025
38 W H -0.2246
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -1.0054
45 R H -1.6010
46 P H -1.2162
47 G H -1.6364
48 R H -2.5248
49 G H -1.5238
50 L H 0.0000
51 E H -1.1893
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.9301
56 I H 0.0000
57 D H -1.5948
58 P H 0.0000
59 D H -2.9891
62 N H -2.3915
63 G H -1.7396
64 D H -1.5907
65 T H -1.2214
66 K H -1.9326
67 N H -1.9375
68 N H -2.2963
69 E H -3.0930
70 K H -2.8382
71 F H 0.0000
72 T H -1.6417
74 S H -1.0629
75 K H -1.1113
76 A H 0.0000
77 T H -0.6329
78 L H 0.0000
79 T H -0.2104
80 V H -0.6860
81 D H -1.2162
82 K H -1.8104
83 P H -0.9162
84 S H -0.8578
85 S H -0.9750
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2330
89 M H 0.0000
90 Q H -0.9846
91 L H 0.0000
92 S H -0.7060
93 S H -0.7920
94 L H 0.0000
95 T H -1.2560
96 S H -1.4516
97 E H -2.0128
98 D H 0.0000
99 S H -0.6328
100 A H 0.0000
101 V H 0.0474
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 R H 0.0000
108 A H 0.0000
109 Y H 1.5335
110 Y H 1.5640
111 S H 0.4924
112 K H 0.1777
113 N H 0.1802
114 A H 0.0000
115 L H 0.0000
116 D H -0.2822
117 Y H 0.0475
118 W H -0.6199
119 G H 0.0000
120 Q H -1.8842
121 G H -1.0334
122 T H 0.0000
123 S H -0.1256
124 V H 0.0000
125 T H -0.0388
126 V H 0.0000
127 S H -0.5055
128 S H -0.6616
1 D L -2.0980
2 I L 0.0000
3 V L 0.5396
4 L L 0.0000
5 T L -0.5882
6 Q L -0.6769
7 S L -0.6462
8 P L -0.5199
9 A L -0.6215
10 S L -1.0382
11 L L -0.7709
12 A L -0.7908
13 V L 0.0000
14 S L -1.2301
15 L L -0.5129
16 G L -1.4031
17 Q L -2.5368
18 R L -2.8421
19 A L 0.0000
20 T L -0.6359
21 I L 0.0000
22 S L -0.8627
23 C L 0.0000
24 R L -2.5900
25 A L 0.0000
26 S L -1.3404
27 E L -2.7311
28 S L -2.4383
29 V L 0.0000
30 D L -1.3094
31 N L -0.6328
34 Y L 0.9386
35 G L 0.0012
36 I L 0.2995
37 S L -0.5596
38 F L -0.4752
39 M L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8856
44 Q L -1.2110
45 K L -1.4526
46 P L -0.9915
47 G L -1.4423
48 Q L -2.1120
49 P L -1.3868
50 P L 0.0000
51 K L -1.4928
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.2797
56 R L -0.3518
57 A L 0.0000
65 S L -0.4827
66 N L -0.5697
67 L L 0.0001
68 E L -0.4458
69 S L -0.4627
70 G L -0.4798
71 I L -0.2792
72 P L -0.1984
74 A L -0.2227
75 R L -0.8378
76 F L 0.0000
77 S L -0.4075
78 G L -0.4110
79 S L -0.7623
80 G L -1.4229
83 S L -1.6835
84 R L -2.8704
85 T L -2.5734
86 D L -2.3377
87 F L 0.0000
88 T L -0.7516
89 L L 0.0000
90 T L -0.7844
91 I L 0.0000
92 N L -2.0483
93 P L -1.8158
94 V L 0.0000
95 E L -1.6573
96 T L -1.1944
97 D L -1.7677
98 D L 0.0000
99 V L -0.4034
100 A L 0.0000
101 T L -1.0170
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 N L -1.5298
109 K L -2.7561
114 D L -2.3110
115 P L -2.2253
116 W L 0.0000
117 T L -0.4128
118 F L 0.1730
119 G L 0.0000
120 G L -0.9202
121 G L -1.0725
122 T L 0.0000
123 K L -1.9927
124 L L 0.0000
125 E L -1.6530
126 I L -0.7663
127 K L -1.6293
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Laboratory of Theory of Biopolymers 2018