| Chain sequence(s) |
H: EVQLQQSGAELVKPGASVKLSCKASGYTFTNYWMHWVKQRPGRGLEWIGRIDPDNGDTKNNEKFTSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARRAYYSKNALDYWGQGTSVTVSS
L: DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVETDDVATYYCQQSNKDPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:13)
[INFO] Main: Simulation completed successfully. (00:01:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1597 | |
| 2 | V | H | -1.4111 | |
| 3 | Q | H | -2.1349 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.1877 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.9822 | |
| 8 | G | H | -0.6883 | |
| 9 | A | H | 0.0527 | |
| 11 | E | H | 0.0825 | |
| 12 | L | H | 1.0643 | |
| 13 | V | H | -0.0537 | |
| 14 | K | H | -1.6308 | |
| 15 | P | H | -1.3179 | |
| 16 | G | H | -1.0804 | |
| 17 | A | H | -0.8480 | |
| 18 | S | H | -0.8770 | |
| 19 | V | H | -0.5811 | |
| 20 | K | H | -1.1571 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.6691 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.7624 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.3988 | |
| 27 | G | H | -1.2461 | |
| 28 | Y | H | -0.6712 | |
| 29 | T | H | -0.5008 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.6258 | |
| 36 | N | H | -1.0927 | |
| 37 | Y | H | 0.0025 | |
| 38 | W | H | -0.2246 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -1.0054 | |
| 45 | R | H | -1.6010 | |
| 46 | P | H | -1.2162 | |
| 47 | G | H | -1.6364 | |
| 48 | R | H | -2.5248 | |
| 49 | G | H | -1.5238 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1893 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | R | H | -0.9301 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -1.5948 | |
| 58 | P | H | 0.0000 | |
| 59 | D | H | -2.9891 | |
| 62 | N | H | -2.3915 | |
| 63 | G | H | -1.7396 | |
| 64 | D | H | -1.5907 | |
| 65 | T | H | -1.2214 | |
| 66 | K | H | -1.9326 | |
| 67 | N | H | -1.9375 | |
| 68 | N | H | -2.2963 | |
| 69 | E | H | -3.0930 | |
| 70 | K | H | -2.8382 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -1.6417 | |
| 74 | S | H | -1.0629 | |
| 75 | K | H | -1.1113 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.6329 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.2104 | |
| 80 | V | H | -0.6860 | |
| 81 | D | H | -1.2162 | |
| 82 | K | H | -1.8104 | |
| 83 | P | H | -0.9162 | |
| 84 | S | H | -0.8578 | |
| 85 | S | H | -0.9750 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2330 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -0.9846 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7060 | |
| 93 | S | H | -0.7920 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2560 | |
| 96 | S | H | -1.4516 | |
| 97 | E | H | -2.0128 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6328 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0474 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | R | H | 0.0000 | |
| 108 | A | H | 0.0000 | |
| 109 | Y | H | 1.5335 | |
| 110 | Y | H | 1.5640 | |
| 111 | S | H | 0.4924 | |
| 112 | K | H | 0.1777 | |
| 113 | N | H | 0.1802 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.2822 | |
| 117 | Y | H | 0.0475 | |
| 118 | W | H | -0.6199 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.8842 | |
| 121 | G | H | -1.0334 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.1256 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0388 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5055 | |
| 128 | S | H | -0.6616 | |
| 1 | D | L | -2.0980 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.5396 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.5882 | |
| 6 | Q | L | -0.6769 | |
| 7 | S | L | -0.6462 | |
| 8 | P | L | -0.5199 | |
| 9 | A | L | -0.6215 | |
| 10 | S | L | -1.0382 | |
| 11 | L | L | -0.7709 | |
| 12 | A | L | -0.7908 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.2301 | |
| 15 | L | L | -0.5129 | |
| 16 | G | L | -1.4031 | |
| 17 | Q | L | -2.5368 | |
| 18 | R | L | -2.8421 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6359 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8627 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.5900 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.3404 | |
| 27 | E | L | -2.7311 | |
| 28 | S | L | -2.4383 | |
| 29 | V | L | 0.0000 | |
| 30 | D | L | -1.3094 | |
| 31 | N | L | -0.6328 | |
| 34 | Y | L | 0.9386 | |
| 35 | G | L | 0.0012 | |
| 36 | I | L | 0.2995 | |
| 37 | S | L | -0.5596 | |
| 38 | F | L | -0.4752 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8856 | |
| 44 | Q | L | -1.2110 | |
| 45 | K | L | -1.4526 | |
| 46 | P | L | -0.9915 | |
| 47 | G | L | -1.4423 | |
| 48 | Q | L | -2.1120 | |
| 49 | P | L | -1.3868 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4928 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.2797 | |
| 56 | R | L | -0.3518 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.4827 | |
| 66 | N | L | -0.5697 | |
| 67 | L | L | 0.0001 | |
| 68 | E | L | -0.4458 | |
| 69 | S | L | -0.4627 | |
| 70 | G | L | -0.4798 | |
| 71 | I | L | -0.2792 | |
| 72 | P | L | -0.1984 | |
| 74 | A | L | -0.2227 | |
| 75 | R | L | -0.8378 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4075 | |
| 78 | G | L | -0.4110 | |
| 79 | S | L | -0.7623 | |
| 80 | G | L | -1.4229 | |
| 83 | S | L | -1.6835 | |
| 84 | R | L | -2.8704 | |
| 85 | T | L | -2.5734 | |
| 86 | D | L | -2.3377 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7516 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7844 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.0483 | |
| 93 | P | L | -1.8158 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.6573 | |
| 96 | T | L | -1.1944 | |
| 97 | D | L | -1.7677 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.4034 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.0170 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.0000 | |
| 108 | N | L | -1.5298 | |
| 109 | K | L | -2.7561 | |
| 114 | D | L | -2.3110 | |
| 115 | P | L | -2.2253 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.4128 | |
| 118 | F | L | 0.1730 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.9202 | |
| 121 | G | L | -1.0725 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.9927 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.6530 | |
| 126 | I | L | -0.7663 | |
| 127 | K | L | -1.6293 |