Project name: Wildtype_CA125 [mutate: MF232A]

Status: done

Started: 2026-03-27 16:46:21
Settings
Chain sequence(s) A: IQLTQSPSSLAVSVGEKITMSCKSSQSLLYSGNQKNYLAWYQQKSGQSPKLLIYWTSTRKSGVPDRFTGSGSGTDFTLTISSVKAEDLAIYYCHQYYTYPWTFGGGTKLEIGGGGSGGGGSGGGGSVQLQQSGPELVKPGASVKMSCKASGYIFTDYYMKWVKQSHGRSLEWIGDINLNNGDTFYNQKFKGRATLTVDKSSSTAYMQLNSLTSEDSAVYYCARSDDYDYGMDYWGQGTTVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues MF232A
Energy difference between WT (input) and mutated protein (by FoldX) 15.1979 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:52)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:30)
Show buried residues

Minimal score value
-1.9466
Maximal score value
2.0535
Average score
-0.2872
Total score value
-69.7834

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 I A 0.2467
3 Q A -1.1133
4 L A 0.0000
5 T A -0.0923
6 Q A -0.1569
7 S A -0.2176
8 P A -0.2455
9 S A -0.2684
10 S A -0.2357
11 L A 0.2293
12 A A -0.0013
13 V A 0.1714
14 S A -0.0303
15 V A 0.1460
16 G A -0.6298
17 E A -1.5190
18 K A -1.9237
19 I A 0.0000
20 T A -0.0624
21 M A 0.0000
22 S A -0.0686
23 C A 0.0000
24 K A -1.6689
25 S A 0.0000
26 S A -0.3368
27 Q A -1.2433
28 S A -0.3571
29 L A 0.0000
30 L A 0.7114
31 Y A 0.9661
32 S A -0.1350
33 G A -0.6066
34 N A -0.8562
35 Q A -1.4945
36 K A -1.3168
37 N A -0.2187
38 Y A 0.1036
39 L A 0.0000
40 A A 0.0000
41 W A 0.0000
42 Y A 0.0000
43 Q A 0.0000
44 Q A 0.0000
45 K A -0.5761
46 S A -0.3938
47 G A -0.7245
48 Q A -1.2877
49 S A -0.2421
50 P A 0.0000
51 K A -1.2698
52 L A 0.0000
53 L A 0.0000
54 I A 0.0000
55 Y A 0.1702
56 W A 0.2353
57 T A 0.0000
58 S A -0.2163
59 T A -0.2344
60 R A -0.9320
61 K A -0.5143
62 S A -0.3536
63 G A -0.4628
64 V A 0.1279
65 P A -0.3837
66 D A -1.8626
67 R A -0.6340
68 F A 0.0000
69 T A -0.0487
70 G A 0.0000
71 S A -0.2108
72 G A -0.3140
73 S A -0.2347
74 G A -0.0516
75 T A -0.3118
76 D A -1.6228
77 F A 0.0000
78 T A -0.0316
79 L A 0.0000
80 T A -0.0232
81 I A 0.0000
82 S A -0.3226
83 S A -0.3330
84 V A 0.0000
85 K A -0.6113
86 A A -0.3993
87 E A -1.8125
88 D A 0.0000
89 L A 0.6317
90 A A 0.0000
91 I A 0.3264
92 Y A 0.0000
93 Y A 0.0000
94 C A 0.0000
95 H A 0.0000
96 Q A 0.0000
97 Y A 0.0000
98 Y A 0.7552
99 T A 0.2550
100 Y A 0.7936
101 P A 0.1878
102 W A 0.0000
103 T A -0.0167
104 F A 0.0000
105 G A 0.0000
106 G A -0.4775
107 G A 0.0000
108 T A 0.0000
109 K A -0.6963
110 L A 0.0000
111 E A -1.1405
112 I A -0.0715
113 G A -0.4272
114 G A -0.6205
115 G A -0.6058
116 G A -0.5904
117 S A -0.3823
118 G A -0.5917
119 G A -0.6390
120 G A -0.6380
121 G A -0.5918
122 S A -0.3841
123 G A -0.5916
124 G A -0.6389
125 G A -0.6385
126 G A -0.5920
127 S A -0.2551
128 V A -0.0369
129 Q A -0.9432
130 L A 0.0000
131 Q A -0.8254
132 Q A 0.0000
133 S A -0.1271
134 G A -0.4784
135 P A -0.4338
136 E A -0.2832
137 L A 1.4896
138 V A 0.1818
139 K A -1.7085
140 P A -0.6468
141 G A -0.5402
142 A A -0.0922
143 S A -0.1816
144 V A 0.0000
145 K A -1.7919
146 M A 0.0000
147 S A -0.0246
148 C A 0.0000
149 K A -0.9070
150 A A 0.0000
151 S A -0.1465
152 G A -0.4051
153 Y A 0.5061
154 I A 2.0535
155 F A 0.0000
156 T A -0.5175
157 D A -1.7937
158 Y A 0.0000
159 Y A 0.1782
160 M A 0.0000
161 K A 0.0000
162 W A 0.0000
163 V A 0.0000
164 K A -0.1975
165 Q A -0.1833
166 S A -0.2343
167 H A -1.0802
168 G A -0.9867
169 R A -1.9466
170 S A -0.4904
171 L A 0.0000
172 E A -0.5185
173 W A 0.0000
174 I A 0.0000
175 G A 0.0000
176 D A 0.0000
177 I A 0.0000
178 N A -0.2375
179 L A 0.0000
180 N A -1.5078
181 N A -1.5571
182 G A -0.8305
183 D A -1.7474
184 T A -0.1696
185 F A 0.9525
186 Y A 0.5088
187 N A 0.0000
188 Q A -1.5028
189 K A -1.9146
190 F A 0.0000
191 K A -1.7842
192 G A -0.8689
193 R A -0.6079
194 A A 0.0000
195 T A -0.0632
196 L A 0.0000
197 T A -0.0152
198 V A 0.1273
199 D A -0.8683
200 K A -1.8530
201 S A -0.5356
202 S A -0.1368
203 S A -0.2261
204 T A 0.0000
205 A A 0.0000
206 Y A 0.2064
207 M A 0.0000
208 Q A -0.9255
209 L A 0.0000
210 N A -0.6039
211 S A -0.3778
212 L A 0.0000
213 T A -0.0614
214 S A -0.5386
215 E A -1.8575
216 D A 0.0000
217 S A -0.0749
218 A A 0.0612
219 V A 0.3662
220 Y A 0.0000
221 Y A 0.0000
222 C A 0.0000
223 A A 0.0000
224 R A 0.0000
225 S A 0.0000
226 D A 0.0000
227 D A -1.5548
228 Y A 0.8673
229 D A -0.4143
230 Y A 0.2955
231 G A 0.0000
232 F A 0.0000 mutated: MF232A
233 D A 0.0000
234 Y A 0.2949
235 W A 0.0000
236 G A 0.0000
237 Q A -1.2098
238 G A -0.2817
239 T A 0.0000
240 T A -0.0216
241 V A 0.0000
242 T A -0.0443
243 V A 0.0000
244 S A -0.2129
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Laboratory of Theory of Biopolymers 2018