| Chain sequence(s) |
A: CDKDEAWKQVEILRRLGAKQIAYRSDDWRDLQEALKKGGDILIVDAT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -1.2147 | |
| 2 | D | A | -3.4170 | |
| 3 | K | A | -4.1956 | |
| 4 | D | A | -4.5691 | |
| 5 | E | A | -4.5588 | |
| 6 | A | A | -3.2171 | |
| 7 | W | A | -3.2970 | |
| 8 | K | A | -3.6589 | |
| 9 | Q | A | -2.8583 | |
| 10 | V | A | 0.0000 | |
| 11 | E | A | -2.3989 | |
| 12 | I | A | -0.9465 | |
| 13 | L | A | -0.8725 | |
| 14 | R | A | -2.1720 | |
| 15 | R | A | -1.5450 | |
| 16 | L | A | 0.1911 | |
| 17 | G | A | -0.9624 | |
| 18 | A | A | -1.4288 | |
| 19 | K | A | -2.4764 | |
| 20 | Q | A | -2.2787 | |
| 21 | I | A | 0.0000 | |
| 22 | A | A | -0.1867 | |
| 23 | Y | A | -0.2294 | |
| 24 | R | A | -1.0796 | |
| 25 | S | A | -1.4467 | |
| 26 | D | A | -1.7800 | |
| 27 | D | A | -1.3957 | |
| 28 | W | A | -0.3978 | |
| 29 | R | A | -1.9645 | |
| 30 | D | A | -2.2761 | |
| 31 | L | A | 0.0000 | |
| 32 | Q | A | -1.3655 | |
| 33 | E | A | -1.9507 | |
| 34 | A | A | 0.0000 | |
| 35 | L | A | -0.9041 | |
| 36 | K | A | -2.2185 | |
| 37 | K | A | -2.2096 | |
| 38 | G | A | -1.8165 | |
| 39 | G | A | 0.0000 | |
| 40 | D | A | -1.3041 | |
| 41 | I | A | 0.5595 | |
| 42 | L | A | 1.1010 | |
| 43 | I | A | 1.0715 | |
| 44 | V | A | 1.2967 | |
| 45 | D | A | -0.2786 | |
| 46 | A | A | -0.0267 | |
| 47 | T | A | -0.2337 |