| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPQHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRSGPEGVPLPAAPPPSPLYVPPPPGSPYAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLATPAPNVYNPSYFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9431 | |
| 2 | L | A | 1.9639 | |
| 3 | P | A | 0.6479 | |
| 4 | P | A | 0.3717 | |
| 5 | T | A | 0.1258 | |
| 6 | T | A | 0.1335 | |
| 7 | P | A | 0.1778 | |
| 8 | V | A | 1.2386 | |
| 9 | A | A | 0.0884 | |
| 10 | K | A | -1.0195 | |
| 11 | V | A | -0.1533 | |
| 12 | Q | A | -1.3993 | |
| 13 | S | A | -1.5570 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4436 | |
| 16 | E | A | -2.4485 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4545 | |
| 20 | P | A | 0.1023 | |
| 21 | T | A | 0.1098 | |
| 22 | S | A | -0.1714 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1086 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3000 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9011 | |
| 31 | R | A | -2.6836 | |
| 32 | L | A | -0.8020 | |
| 33 | L | A | 1.1620 | |
| 34 | T | A | 1.3707 | |
| 35 | V | A | 1.8413 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2155 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6075 | |
| 40 | K | A | -1.6438 | |
| 41 | D | A | -0.9529 | |
| 42 | I | A | 0.7986 | |
| 43 | V | A | 0.9873 | |
| 44 | K | A | -1.2041 | |
| 45 | N | A | -1.9414 | |
| 46 | G | A | -1.2508 | |
| 47 | K | A | -1.0090 | |
| 48 | V | A | 1.3730 | |
| 49 | V | A | 1.9964 | |
| 50 | V | A | 1.2291 | |
| 51 | P | A | 0.4146 | |
| 52 | K | A | -0.6538 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1661 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4071 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2746 | |
| 70 | K | A | -1.7959 | |
| 71 | F | A | -0.6485 | |
| 72 | A | A | -0.5757 | |
| 73 | L | A | -0.8746 | |
| 74 | P | A | -1.2856 | |
| 75 | Q | A | -2.4979 | |
| 76 | K | A | -3.1043 | |
| 77 | D | A | -2.9885 | |
| 78 | F | A | -1.6666 | |
| 79 | Y | A | -1.8858 | |
| 80 | D | A | -2.6896 | |
| 81 | P | A | -2.3055 | |
| 82 | E | A | -3.0470 | |
| 83 | K | A | -3.3936 | |
| 84 | E | A | -2.4546 | |
| 85 | R | A | -1.2868 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6180 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9896 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3643 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6969 | |
| 99 | G | A | -0.5439 | |
| 100 | P | A | -0.4118 | |
| 101 | L | A | 0.0296 | |
| 102 | G | A | -0.1938 | |
| 103 | K | A | -0.5598 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4172 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1598 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4028 | |
| 110 | L | A | 0.0986 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1284 | |
| 113 | K | A | -0.4905 | |
| 114 | L | A | -0.9926 | |
| 115 | G | A | -0.7711 | |
| 116 | D | A | -1.2163 | |
| 117 | T | A | -0.8985 | |
| 118 | E | A | -1.8241 | |
| 119 | N | A | -1.9716 | |
| 120 | P | A | -1.4184 | |
| 121 | T | A | -0.7314 | |
| 122 | A | A | -0.5217 | |
| 123 | P | A | -0.0021 | |
| 124 | Q | A | -0.4356 | |
| 125 | H | A | -0.6337 | |
| 126 | P | A | -1.2984 | |
| 127 | G | A | -1.4782 | |
| 128 | A | A | -1.2668 | |
| 129 | D | A | -2.2239 | |
| 130 | D | A | -1.7199 | |
| 131 | R | A | -1.0958 | |
| 132 | V | A | 0.2567 | |
| 133 | A | A | 0.4478 | |
| 134 | F | A | 0.3092 | |
| 135 | S | A | -0.0485 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4740 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5690 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2132 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1923 | |
| 157 | D | A | 0.5334 | |
| 158 | I | A | 1.2462 | |
| 159 | A | A | 0.9277 | |
| 160 | P | A | 0.0741 | |
| 161 | P | A | 0.4351 | |
| 162 | C | A | 0.4997 | |
| 163 | P | A | -0.0015 | |
| 164 | G | A | -0.1036 | |
| 165 | L | A | 0.5494 | |
| 166 | P | A | -0.1235 | |
| 167 | P | A | -0.3438 | |
| 168 | G | A | -0.4299 | |
| 169 | A | A | 0.2880 | |
| 170 | C | A | 1.0864 | |
| 171 | P | A | 0.7800 | |
| 172 | P | A | 1.1358 | |
| 173 | I | A | 2.3660 | |
| 174 | Q | A | 1.2679 | |
| 175 | L | A | 1.5502 | |
| 176 | V | A | 0.8878 | |
| 177 | N | A | -0.3009 | |
| 178 | S | A | -0.1006 | |
| 179 | V | A | 0.4019 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3719 | |
| 182 | D | A | 0.0664 | |
| 183 | G | A | -0.1631 | |
| 184 | D | A | -0.5470 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1214 | |
| 190 | F | A | 0.0542 | |
| 191 | G | A | -0.1135 | |
| 192 | N | A | -0.2680 | |
| 193 | M | A | -0.1147 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3865 | |
| 197 | E | A | -2.6066 | |
| 198 | L | A | -1.2085 | |
| 199 | Q | A | -2.5318 | |
| 200 | Q | A | -3.2940 | |
| 201 | D | A | -3.4512 | |
| 202 | R | A | -3.3212 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2134 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3470 | |
| 211 | S | A | -1.8948 | |
| 212 | T | A | -1.4469 | |
| 213 | R | A | -2.0935 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1531 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3039 | |
| 220 | L | A | 0.5504 | |
| 221 | K | A | -1.2190 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8552 | |
| 224 | N | A | -1.6201 | |
| 225 | E | A | -1.2742 | |
| 226 | A | A | -0.6060 | |
| 227 | Y | A | -0.3665 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6821 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0757 | |
| 234 | F | A | 0.2653 | |
| 235 | G | A | -0.8393 | |
| 236 | R | A | -2.6424 | |
| 237 | R | A | -2.9514 | |
| 238 | E | A | -2.1506 | |
| 239 | Q | A | -0.1981 | |
| 240 | V | A | 1.4034 | |
| 241 | Y | A | 1.0919 | |
| 242 | A | A | 0.1463 | |
| 243 | R | A | -1.1248 | |
| 244 | H | A | -1.0178 | |
| 245 | F | A | 0.0307 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8113 | |
| 249 | S | A | -1.2400 | |
| 250 | G | A | -1.1579 | |
| 251 | P | A | -0.6215 | |
| 252 | E | A | -0.4186 | |
| 253 | G | A | 0.0561 | |
| 254 | V | A | 1.3016 | |
| 255 | P | A | 0.4406 | |
| 256 | L | A | 0.9879 | |
| 257 | P | A | 0.4547 | |
| 258 | A | A | 0.1937 | |
| 259 | A | A | 0.3993 | |
| 260 | P | A | -0.2305 | |
| 261 | P | A | -0.1435 | |
| 262 | P | A | 0.0654 | |
| 263 | S | A | 0.5820 | |
| 264 | P | A | 0.6853 | |
| 265 | L | A | 1.9200 | |
| 266 | Y | A | 1.7342 | |
| 267 | V | A | 1.9362 | |
| 268 | P | A | 1.0081 | |
| 269 | P | A | 0.6808 | |
| 270 | P | A | -0.1880 | |
| 271 | P | A | -0.5024 | |
| 272 | G | A | -0.3353 | |
| 273 | S | A | 0.1424 | |
| 274 | P | A | 0.4442 | |
| 275 | Y | A | 1.5324 | |
| 276 | A | A | 1.2915 | |
| 277 | V | A | 2.2052 | |
| 278 | L | A | 1.6326 | |
| 279 | P | A | 0.3364 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.1081 | |
| 282 | D | A | -0.8473 | |
| 283 | Y | A | 0.7253 | |
| 284 | F | A | 0.6482 | |
| 285 | G | A | 0.1361 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9034 | |
| 291 | L | A | 1.6224 | |
| 292 | V | A | 0.6389 | |
| 293 | S | A | -0.1612 | |
| 294 | S | A | -0.9639 | |
| 295 | D | A | -1.8424 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1402 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6636 | |
| 301 | R | A | -1.9230 | |
| 302 | P | A | -1.0048 | |
| 303 | F | A | -0.1952 | |
| 304 | W | A | -0.5507 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0735 | |
| 307 | R | A | -2.8313 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3791 | |
| 310 | G | A | -1.2244 | |
| 311 | N | A | -1.2705 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8104 | |
| 319 | N | A | -0.8578 | |
| 320 | E | A | -1.0396 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3360 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0470 | |
| 333 | N | A | 0.5850 | |
| 334 | F | A | 1.7942 | |
| 335 | T | A | 0.8849 | |
| 336 | I | A | 0.4102 | |
| 337 | S | A | -0.9900 | |
| 338 | Q | A | -1.7780 | |
| 339 | Q | A | -1.3495 | |
| 340 | L | A | 0.5579 | |
| 341 | A | A | 0.3327 | |
| 342 | T | A | -0.0854 | |
| 343 | P | A | -0.4207 | |
| 344 | A | A | -0.0067 | |
| 345 | P | A | 0.1534 | |
| 346 | N | A | -0.2493 | |
| 347 | V | A | 1.6815 | |
| 348 | Y | A | 1.6602 | |
| 349 | N | A | 0.4263 | |
| 350 | P | A | -0.3529 | |
| 351 | S | A | -0.1090 | |
| 352 | Y | A | 0.4469 | |
| 353 | F | A | -0.7151 | |
| 354 | K | A | -1.8990 | |
| 355 | N | A | -1.8571 | |
| 356 | Y | A | -0.1325 | |
| 357 | L | A | 0.6606 | |
| 358 | R | A | 1.0064 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3976 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0771 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0464 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6866 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3046 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3143 | |
| 376 | L | A | -1.7132 | |
| 377 | D | A | -1.9968 | |
| 378 | P | A | -1.0420 | |
| 379 | G | A | -1.0132 | |
| 380 | V | A | -0.9340 | |
| 381 | L | A | -0.5301 | |
| 382 | A | A | -0.6510 | |
| 383 | H | A | -0.7990 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3879 | |
| 386 | T | A | -0.5377 | |
| 387 | M | A | -0.2877 | |
| 388 | N | A | -0.8550 | |
| 389 | P | A | -1.2340 | |
| 390 | T | A | -1.4313 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4326 | |
| 393 | E | A | -2.7618 | |
| 394 | N | A | -2.3351 | |
| 395 | W | A | -1.3708 | |
| 396 | N | A | -1.1262 | |
| 397 | L | A | -0.2062 | |
| 398 | G | A | 0.5130 | |
| 399 | F | A | 2.4097 | |
| 400 | V | A | 1.8194 | |
| 401 | P | A | 0.0467 | |
| 402 | P | A | -1.8335 | |
| 403 | K | A | -3.3016 | |
| 404 | E | A | -3.7555 | |
| 405 | R | A | -3.8713 | |
| 406 | E | A | -3.7792 | |
| 407 | D | A | -2.8857 | |
| 408 | P | A | -1.7716 | |
| 409 | Y | A | -0.9965 | |
| 410 | K | A | -2.1240 | |
| 411 | G | A | -0.6421 | |
| 412 | L | A | 0.6700 | |
| 413 | I | A | 1.5825 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3942 | |
| 416 | E | A | -1.6931 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9593 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0721 | |
| 421 | E | A | -2.8023 | |
| 422 | R | A | -2.6713 | |
| 423 | F | A | -1.3007 | |
| 424 | S | A | -1.4869 | |
| 425 | Q | A | -1.9296 | |
| 426 | D | A | -2.9055 | |
| 427 | L | A | -1.9848 | |
| 428 | D | A | -2.7701 | |
| 429 | Q | A | -2.6141 | |
| 430 | F | A | -1.4114 | |
| 431 | A | A | -0.8863 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5473 | |
| 435 | K | A | -0.6845 | |
| 436 | F | A | 0.1706 | |
| 437 | L | A | 1.0446 | |
| 438 | Y | A | 0.8415 | |
| 439 | Q | A | -0.2678 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine