| Chain sequence(s) |
A: VLQDMCRTDQNKCSENSICVNQVNKEPLCICLFNYEKSIAGLSTQGAHTCVMNNPCLTNNGGCSPNEICTLKNRKVVCSCGENYRPKGKESQLGPMAQRGQLGKLGQLGQLGQLGQLGQLGKRGKLGQLGNPPTPEDNACIPKASEADQTFSFKYNDDMAIILGSCGIIQFSQKSEQVIWKISKSHNFYIFNYEYSSEGMLEAQIVNKHTSSILYLKKRQGGKVFYADFELAHEGCSYGNMFPYSHSMMA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:45)
[INFO] Main: Simulation completed successfully. (00:02:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 2.0993 | |
| 2 | L | A | 1.3168 | |
| 3 | Q | A | -1.0739 | |
| 4 | D | A | -2.4868 | |
| 5 | M | A | -2.7619 | |
| 6 | C | A | -2.4513 | |
| 7 | R | A | -3.7411 | |
| 8 | T | A | -2.7639 | |
| 9 | D | A | -3.3458 | |
| 10 | Q | A | -3.6152 | |
| 11 | N | A | -3.2243 | |
| 12 | K | A | -3.4491 | |
| 13 | C | A | -1.1645 | |
| 14 | S | A | -1.2034 | |
| 15 | E | A | -1.9198 | |
| 16 | N | A | -0.3334 | |
| 17 | S | A | 0.5249 | |
| 18 | I | A | 1.8057 | |
| 19 | C | A | 0.6389 | |
| 20 | V | A | 0.7657 | |
| 21 | N | A | -1.1247 | |
| 22 | Q | A | -1.0103 | |
| 23 | V | A | 0.3390 | |
| 24 | N | A | -1.7208 | |
| 25 | K | A | -2.8195 | |
| 26 | E | A | -2.7706 | |
| 27 | P | A | -1.4172 | |
| 28 | L | A | 0.1598 | |
| 29 | C | A | 0.5977 | |
| 30 | I | A | 1.6466 | |
| 31 | C | A | 0.8121 | |
| 32 | L | A | 1.4509 | |
| 33 | F | A | 1.7836 | |
| 34 | N | A | 0.4883 | |
| 35 | Y | A | 0.3207 | |
| 36 | E | A | -0.8746 | |
| 37 | K | A | -0.4795 | |
| 38 | S | A | 0.5395 | |
| 39 | I | A | 1.7401 | |
| 40 | A | A | 0.9239 | |
| 41 | G | A | 0.5895 | |
| 42 | L | A | 0.8656 | |
| 43 | S | A | -0.2166 | |
| 44 | T | A | -0.4628 | |
| 45 | Q | A | -1.5017 | |
| 46 | G | A | -0.9588 | |
| 47 | A | A | -1.1730 | |
| 48 | H | A | -0.8569 | |
| 49 | T | A | -0.5184 | |
| 50 | C | A | 0.0000 | |
| 51 | V | A | 0.6307 | |
| 52 | M | A | 0.7508 | |
| 53 | N | A | -0.3100 | |
| 54 | N | A | -0.1513 | |
| 55 | P | A | -0.4624 | |
| 56 | C | A | 0.3791 | |
| 57 | L | A | 0.9136 | |
| 58 | T | A | -0.1880 | |
| 59 | N | A | -1.3769 | |
| 60 | N | A | -0.5283 | |
| 61 | G | A | -0.3791 | |
| 62 | G | A | -0.9966 | |
| 63 | C | A | 0.0000 | |
| 64 | S | A | -0.6426 | |
| 65 | P | A | -0.2347 | |
| 66 | N | A | -0.1775 | |
| 67 | E | A | 0.0000 | |
| 68 | I | A | 1.4688 | |
| 69 | C | A | 0.8713 | |
| 70 | T | A | 0.0136 | |
| 71 | L | A | -1.4259 | |
| 72 | K | A | -2.9954 | |
| 73 | N | A | -3.2909 | |
| 74 | R | A | -3.6237 | |
| 75 | K | A | -3.1314 | |
| 76 | V | A | -1.0738 | |
| 77 | V | A | -0.1123 | |
| 78 | C | A | 0.5817 | |
| 79 | S | A | 0.2402 | |
| 80 | C | A | -0.4891 | |
| 81 | G | A | -0.8558 | |
| 82 | E | A | -2.1577 | |
| 83 | N | A | -2.0860 | |
| 84 | Y | A | 0.0000 | |
| 85 | R | A | -2.0784 | |
| 86 | P | A | -1.9578 | |
| 87 | K | A | -2.7466 | |
| 88 | G | A | -2.8020 | |
| 89 | K | A | -3.6226 | |
| 90 | E | A | -3.2086 | |
| 91 | S | A | -1.8893 | |
| 92 | Q | A | -1.5208 | |
| 93 | L | A | 0.4746 | |
| 94 | G | A | -0.1505 | |
| 95 | P | A | 0.0845 | |
| 96 | M | A | 0.5718 | |
| 97 | A | A | -0.7266 | |
| 98 | Q | A | -2.0987 | |
| 99 | R | A | -2.5949 | |
| 100 | G | A | -1.9724 | |
| 101 | Q | A | -1.3368 | |
| 102 | L | A | 0.2298 | |
| 103 | G | A | -0.5695 | |
| 104 | K | A | -1.0588 | |
| 105 | L | A | 0.4604 | |
| 106 | G | A | -0.4607 | |
| 107 | Q | A | -0.7682 | |
| 108 | L | A | 0.7087 | |
| 109 | G | A | -0.3531 | |
| 110 | Q | A | -0.7168 | |
| 111 | L | A | 0.7044 | |
| 112 | G | A | -0.3168 | |
| 113 | Q | A | -0.5920 | |
| 114 | L | A | 0.7147 | |
| 115 | G | A | -0.2366 | |
| 116 | Q | A | -0.5884 | |
| 117 | L | A | 0.7311 | |
| 118 | G | A | -0.2708 | |
| 119 | Q | A | -0.7880 | |
| 120 | L | A | 0.2365 | |
| 121 | G | A | -1.4349 | |
| 122 | K | A | -2.9918 | |
| 123 | R | A | -3.0653 | |
| 124 | G | A | -2.3413 | |
| 125 | K | A | -2.1716 | |
| 126 | L | A | 0.0301 | |
| 127 | G | A | -0.4789 | |
| 128 | Q | A | -0.8861 | |
| 129 | L | A | 0.4655 | |
| 130 | G | A | -0.8589 | |
| 131 | N | A | -1.5038 | |
| 132 | P | A | -0.9588 | |
| 133 | P | A | -1.5204 | |
| 134 | T | A | -1.5991 | |
| 135 | P | A | -1.7670 | |
| 136 | E | A | -2.8369 | |
| 137 | D | A | -2.9622 | |
| 138 | N | A | -2.4365 | |
| 139 | A | A | -1.7613 | |
| 140 | C | A | 0.0000 | |
| 141 | I | A | -0.6664 | |
| 142 | P | A | 0.0000 | |
| 143 | K | A | -2.1700 | |
| 144 | A | A | -1.5599 | |
| 145 | S | A | -1.5663 | |
| 146 | E | A | -2.1211 | |
| 147 | A | A | -1.2116 | |
| 148 | D | A | -1.5704 | |
| 149 | Q | A | -1.2839 | |
| 150 | T | A | -0.9921 | |
| 151 | F | A | 0.0000 | |
| 152 | S | A | -0.5637 | |
| 153 | F | A | 0.0000 | |
| 154 | K | A | -2.1172 | |
| 155 | Y | A | -2.0312 | |
| 156 | N | A | -3.1414 | |
| 157 | D | A | -3.3399 | |
| 158 | D | A | -3.4483 | |
| 159 | M | A | 0.0000 | |
| 160 | A | A | 0.0000 | |
| 161 | I | A | 0.0000 | |
| 162 | I | A | 0.5841 | |
| 163 | L | A | 0.0000 | |
| 164 | G | A | -0.4551 | |
| 165 | S | A | -0.6784 | |
| 166 | C | A | 0.0000 | |
| 167 | G | A | -0.0785 | |
| 168 | I | A | 0.6173 | |
| 169 | I | A | 0.0000 | |
| 170 | Q | A | -0.4325 | |
| 171 | F | A | 0.0000 | |
| 172 | S | A | -2.1331 | |
| 173 | Q | A | -2.9276 | |
| 174 | K | A | -2.7010 | |
| 175 | S | A | -2.0240 | |
| 176 | E | A | -2.5396 | |
| 177 | Q | A | -1.5868 | |
| 178 | V | A | 0.0000 | |
| 179 | I | A | 0.7978 | |
| 180 | W | A | 0.0000 | |
| 181 | K | A | -0.1110 | |
| 182 | I | A | -0.6670 | |
| 183 | S | A | -1.2774 | |
| 184 | K | A | -2.3974 | |
| 185 | S | A | -1.7514 | |
| 186 | H | A | -1.6500 | |
| 187 | N | A | -1.0597 | |
| 188 | F | A | 1.4589 | |
| 189 | Y | A | 1.6092 | |
| 190 | I | A | 1.5057 | |
| 191 | F | A | -0.1219 | |
| 192 | N | A | -1.6212 | |
| 193 | Y | A | 0.0000 | |
| 194 | E | A | -2.5020 | |
| 195 | Y | A | -2.2625 | |
| 196 | S | A | -2.1222 | |
| 197 | S | A | -1.8418 | |
| 198 | E | A | -2.6082 | |
| 199 | G | A | -1.6722 | |
| 200 | M | A | -0.9788 | |
| 201 | L | A | 0.0000 | |
| 202 | E | A | -1.0914 | |
| 203 | A | A | 0.0000 | |
| 204 | Q | A | -1.1232 | |
| 205 | I | A | 0.0000 | |
| 206 | V | A | 0.0000 | |
| 207 | N | A | -1.5067 | |
| 208 | K | A | -2.2875 | |
| 209 | H | A | -2.1750 | |
| 210 | T | A | -1.7029 | |
| 211 | S | A | -1.7242 | |
| 212 | S | A | 0.0000 | |
| 213 | I | A | 0.0000 | |
| 214 | L | A | 0.0000 | |
| 215 | Y | A | 0.0000 | |
| 216 | L | A | 0.0000 | |
| 217 | K | A | -0.7182 | |
| 218 | K | A | -1.7691 | |
| 219 | R | A | -2.9382 | |
| 220 | Q | A | -2.8698 | |
| 221 | G | A | -1.8682 | |
| 222 | G | A | -1.7790 | |
| 223 | K | A | -1.8269 | |
| 224 | V | A | -0.5669 | |
| 225 | F | A | -0.1629 | |
| 226 | Y | A | 0.0024 | |
| 227 | A | A | -0.4266 | |
| 228 | D | A | -1.0542 | |
| 229 | F | A | -0.9767 | |
| 230 | E | A | -1.9396 | |
| 231 | L | A | 0.0000 | |
| 232 | A | A | -0.9059 | |
| 233 | H | A | 0.0000 | |
| 234 | E | A | -2.3416 | |
| 235 | G | A | -1.8358 | |
| 236 | C | A | -1.1188 | |
| 237 | S | A | -0.9466 | |
| 238 | Y | A | -0.6213 | |
| 239 | G | A | -0.9844 | |
| 240 | N | A | -1.1800 | |
| 241 | M | A | -0.1137 | |
| 242 | F | A | 0.7951 | |
| 243 | P | A | 0.7847 | |
| 244 | Y | A | 0.4435 | |
| 245 | S | A | -0.8534 | |
| 246 | H | A | -1.1045 | |
| 247 | S | A | -0.2311 | |
| 248 | M | A | 1.1706 | |
| 249 | M | A | 1.3918 | |
| 250 | A | A | 0.8687 |