Project name: 5a41ad7e42a2986

Status: done

Started: 2026-07-08 19:21:08
Settings
Chain sequence(s) A: VLQDMCRTDQNKCSENSICVNQVNKEPLCICLFNYEKSIAGLSTQGAHTCVMNNPCLTNNGGCSPNEICTLKNRKVVCSCGENYRPKGKESQLGPMAQRGQLGKLGQLGQLGQLGQLGQLGKRGKLGQLGNPPTPEDNACIPKASEADQTFSFKYNDDMAIILGSCGIIQFSQKSEQVIWKISKSHNFYIFNYEYSSEGMLEAQIVNKHTSSILYLKKRQGGKVFYADFELAHEGCSYGNMFPYSHSMMA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:47)
Show buried residues

Minimal score value
-3.7411
Maximal score value
2.0993
Average score
-0.8526
Total score value
-213.1584

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 2.0993
2 L A 1.3168
3 Q A -1.0739
4 D A -2.4868
5 M A -2.7619
6 C A -2.4513
7 R A -3.7411
8 T A -2.7639
9 D A -3.3458
10 Q A -3.6152
11 N A -3.2243
12 K A -3.4491
13 C A -1.1645
14 S A -1.2034
15 E A -1.9198
16 N A -0.3334
17 S A 0.5249
18 I A 1.8057
19 C A 0.6389
20 V A 0.7657
21 N A -1.1247
22 Q A -1.0103
23 V A 0.3390
24 N A -1.7208
25 K A -2.8195
26 E A -2.7706
27 P A -1.4172
28 L A 0.1598
29 C A 0.5977
30 I A 1.6466
31 C A 0.8121
32 L A 1.4509
33 F A 1.7836
34 N A 0.4883
35 Y A 0.3207
36 E A -0.8746
37 K A -0.4795
38 S A 0.5395
39 I A 1.7401
40 A A 0.9239
41 G A 0.5895
42 L A 0.8656
43 S A -0.2166
44 T A -0.4628
45 Q A -1.5017
46 G A -0.9588
47 A A -1.1730
48 H A -0.8569
49 T A -0.5184
50 C A 0.0000
51 V A 0.6307
52 M A 0.7508
53 N A -0.3100
54 N A -0.1513
55 P A -0.4624
56 C A 0.3791
57 L A 0.9136
58 T A -0.1880
59 N A -1.3769
60 N A -0.5283
61 G A -0.3791
62 G A -0.9966
63 C A 0.0000
64 S A -0.6426
65 P A -0.2347
66 N A -0.1775
67 E A 0.0000
68 I A 1.4688
69 C A 0.8713
70 T A 0.0136
71 L A -1.4259
72 K A -2.9954
73 N A -3.2909
74 R A -3.6237
75 K A -3.1314
76 V A -1.0738
77 V A -0.1123
78 C A 0.5817
79 S A 0.2402
80 C A -0.4891
81 G A -0.8558
82 E A -2.1577
83 N A -2.0860
84 Y A 0.0000
85 R A -2.0784
86 P A -1.9578
87 K A -2.7466
88 G A -2.8020
89 K A -3.6226
90 E A -3.2086
91 S A -1.8893
92 Q A -1.5208
93 L A 0.4746
94 G A -0.1505
95 P A 0.0845
96 M A 0.5718
97 A A -0.7266
98 Q A -2.0987
99 R A -2.5949
100 G A -1.9724
101 Q A -1.3368
102 L A 0.2298
103 G A -0.5695
104 K A -1.0588
105 L A 0.4604
106 G A -0.4607
107 Q A -0.7682
108 L A 0.7087
109 G A -0.3531
110 Q A -0.7168
111 L A 0.7044
112 G A -0.3168
113 Q A -0.5920
114 L A 0.7147
115 G A -0.2366
116 Q A -0.5884
117 L A 0.7311
118 G A -0.2708
119 Q A -0.7880
120 L A 0.2365
121 G A -1.4349
122 K A -2.9918
123 R A -3.0653
124 G A -2.3413
125 K A -2.1716
126 L A 0.0301
127 G A -0.4789
128 Q A -0.8861
129 L A 0.4655
130 G A -0.8589
131 N A -1.5038
132 P A -0.9588
133 P A -1.5204
134 T A -1.5991
135 P A -1.7670
136 E A -2.8369
137 D A -2.9622
138 N A -2.4365
139 A A -1.7613
140 C A 0.0000
141 I A -0.6664
142 P A 0.0000
143 K A -2.1700
144 A A -1.5599
145 S A -1.5663
146 E A -2.1211
147 A A -1.2116
148 D A -1.5704
149 Q A -1.2839
150 T A -0.9921
151 F A 0.0000
152 S A -0.5637
153 F A 0.0000
154 K A -2.1172
155 Y A -2.0312
156 N A -3.1414
157 D A -3.3399
158 D A -3.4483
159 M A 0.0000
160 A A 0.0000
161 I A 0.0000
162 I A 0.5841
163 L A 0.0000
164 G A -0.4551
165 S A -0.6784
166 C A 0.0000
167 G A -0.0785
168 I A 0.6173
169 I A 0.0000
170 Q A -0.4325
171 F A 0.0000
172 S A -2.1331
173 Q A -2.9276
174 K A -2.7010
175 S A -2.0240
176 E A -2.5396
177 Q A -1.5868
178 V A 0.0000
179 I A 0.7978
180 W A 0.0000
181 K A -0.1110
182 I A -0.6670
183 S A -1.2774
184 K A -2.3974
185 S A -1.7514
186 H A -1.6500
187 N A -1.0597
188 F A 1.4589
189 Y A 1.6092
190 I A 1.5057
191 F A -0.1219
192 N A -1.6212
193 Y A 0.0000
194 E A -2.5020
195 Y A -2.2625
196 S A -2.1222
197 S A -1.8418
198 E A -2.6082
199 G A -1.6722
200 M A -0.9788
201 L A 0.0000
202 E A -1.0914
203 A A 0.0000
204 Q A -1.1232
205 I A 0.0000
206 V A 0.0000
207 N A -1.5067
208 K A -2.2875
209 H A -2.1750
210 T A -1.7029
211 S A -1.7242
212 S A 0.0000
213 I A 0.0000
214 L A 0.0000
215 Y A 0.0000
216 L A 0.0000
217 K A -0.7182
218 K A -1.7691
219 R A -2.9382
220 Q A -2.8698
221 G A -1.8682
222 G A -1.7790
223 K A -1.8269
224 V A -0.5669
225 F A -0.1629
226 Y A 0.0024
227 A A -0.4266
228 D A -1.0542
229 F A -0.9767
230 E A -1.9396
231 L A 0.0000
232 A A -0.9059
233 H A 0.0000
234 E A -2.3416
235 G A -1.8358
236 C A -1.1188
237 S A -0.9466
238 Y A -0.6213
239 G A -0.9844
240 N A -1.1800
241 M A -0.1137
242 F A 0.7951
243 P A 0.7847
244 Y A 0.4435
245 S A -0.8534
246 H A -1.1045
247 S A -0.2311
248 M A 1.1706
249 M A 1.3918
250 A A 0.8687
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Laboratory of Theory of Biopolymers 2018