| Chain sequence(s) |
A: GIVEQCCCKICSLHQLERKCPPHEDDNCHSHLVFRLWDDCKHRGFFYNEHS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.0732 | |
| 2 | I | A | -1.1467 | |
| 3 | V | A | -1.5999 | |
| 4 | E | A | -2.3980 | |
| 5 | Q | A | -2.1019 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | 0.0000 | |
| 8 | C | A | -0.1266 | |
| 9 | K | A | -1.2754 | |
| 10 | I | A | 0.2276 | |
| 11 | C | A | 0.0000 | |
| 12 | S | A | -1.1658 | |
| 13 | L | A | -1.2839 | |
| 14 | H | A | -2.4799 | |
| 15 | Q | A | -2.6699 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -3.0564 | |
| 18 | R | A | -3.7212 | |
| 19 | K | A | -3.1959 | |
| 20 | C | A | -3.0881 | |
| 21 | P | A | -2.1091 | |
| 22 | P | A | -2.0155 | |
| 23 | H | A | -2.6614 | |
| 24 | E | A | -3.8279 | |
| 25 | D | A | -4.2326 | |
| 26 | D | A | -3.7123 | |
| 27 | N | A | -2.9388 | |
| 28 | C | A | -2.4972 | |
| 29 | H | A | -2.0433 | |
| 30 | S | A | -0.9383 | |
| 31 | H | A | -1.0262 | |
| 32 | L | A | -0.6345 | |
| 33 | V | A | -0.0069 | |
| 34 | F | A | 0.6052 | |
| 35 | R | A | -1.6270 | |
| 36 | L | A | 0.0000 | |
| 37 | W | A | -0.7624 | |
| 38 | D | A | -2.2695 | |
| 39 | D | A | -2.4944 | |
| 40 | C | A | 0.0000 | |
| 41 | K | A | -2.8277 | |
| 42 | H | A | -2.9280 | |
| 43 | R | A | -2.8759 | |
| 44 | G | A | -1.4914 | |
| 45 | F | A | 0.1432 | |
| 46 | F | A | 1.2680 | |
| 47 | Y | A | 0.4403 | |
| 48 | N | A | -0.5091 | |
| 49 | E | A | -1.1074 | |
| 50 | H | A | -1.2508 | |
| 51 | S | A | -1.0847 |