Project name: 5a7b919487daf22

Status: done

Started: 2024-12-30 06:30:54
Settings
Chain sequence(s) E: MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
input PDB
Selected Chain(s) E
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with E chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:24)
Show buried residues

Minimal score value
-4.0792
Maximal score value
2.2224
Average score
-0.7132
Total score value
-123.3847

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M E 0.5637
2 D E 0.2222
3 V E 1.0704
4 T E 0.9198
5 I E 1.1471
6 Q E 0.0000
7 H E -0.4341
8 P E -0.6176
9 W E -0.5092
10 F E 0.0000
11 K E -2.2521
12 R E -2.4926
13 T E -0.8306
14 L E 0.0000
15 G E -0.6968
16 P E -0.1150
17 F E 0.0000
18 Y E 1.3256
19 P E 0.9573
20 S E 0.4161
21 R E -1.5574
22 L E -0.0826
23 F E 0.0000
24 D E -0.7602
25 Q E -1.3294
26 F E -0.0303
27 F E 0.1844
28 G E -0.7223
29 E E -0.9115
30 G E -0.1541
31 L E 1.7592
32 F E 2.0704
33 E E 0.0222
34 Y E 0.8631
35 D E -0.2724
36 L E 1.7979
37 L E 2.2224
38 P E 1.3282
39 F E 1.8850
40 L E 1.4336
41 S E 0.5285
42 S E 0.7111
43 T E 1.0670
44 I E 1.9223
45 S E 0.0000
46 P E 0.0000
47 Y E 0.7377
48 Y E 0.0000
49 R E -0.8365
50 Q E 0.0000
51 S E 0.0784
52 L E 1.6632
53 F E 0.0000
54 R E 0.0000
55 T E 0.6398
56 V E 1.4485
57 L E 0.1609
58 D E -1.0550
59 S E -0.4390
60 G E -0.2297
61 I E 1.2826
62 S E 0.0000
63 E E -0.3839
64 V E 0.0000
65 R E -0.3236
66 S E 0.0000
67 D E -2.0379
68 R E -3.0601
69 D E -2.9134
70 K E -1.9974
71 F E 0.0000
72 V E 0.0000
73 I E 0.0000
74 F E 0.0000
75 L E 0.0000
76 D E -1.0499
77 V E 0.0000
78 K E -2.1916
79 H E -2.4540
80 F E -2.1935
81 S E -1.1831
82 P E 0.0000
83 E E -2.2478
84 D E -2.2129
85 L E 0.0000
86 T E -1.0278
87 V E 0.0000
88 K E -2.2377
89 V E 0.0000
90 Q E -2.4654
91 D E -2.3429
92 D E -1.3127
93 F E -1.3922
94 V E 0.0000
95 E E -1.9722
96 I E 0.0000
97 H E -2.0304
98 G E 0.0000
99 K E -4.0792
100 H E -3.6465
101 N E -3.7016
102 E E -3.7224
103 R E -3.8829
104 Q E -3.3550
105 D E -3.3517
106 D E -3.2516
107 H E -2.3082
108 G E -1.6794
109 Y E -1.0591
110 I E -1.2015
111 S E -2.9538
112 R E -3.7876
113 E E -3.8616
114 F E -1.9072
115 H E -2.1562
116 R E 0.0000
117 R E -2.3385
118 Y E -0.8505
119 R E -0.6529
120 L E 0.0000
121 P E 0.0000
122 S E -0.1230
123 N E 0.0000
124 V E 0.0000
125 D E -0.9733
126 Q E 0.0000
127 S E -1.1319
128 A E -0.5353
129 L E 0.0000
130 S E -0.6808
131 C E 0.0000
132 S E 0.0000
133 L E -1.2484
134 S E -1.3104
135 A E -1.1381
136 D E -2.0661
137 G E -1.5145
138 M E -1.1224
139 L E 0.0000
140 T E 0.0000
141 F E 0.0000
142 C E 0.0000
143 G E 0.0000
144 P E -0.7642
145 K E 0.0000
146 I E 0.4466
147 Q E -0.9390
148 T E -1.0634
149 G E -0.5309
150 L E 0.0938
151 D E -0.5109
152 A E -0.6446
153 T E -0.6124
154 H E 0.0000
155 A E -1.7679
156 E E -3.1209
157 R E -2.6200
158 A E -1.5361
159 I E 0.0000
160 P E -0.7154
161 V E -0.6508
162 S E -1.2160
163 R E -2.3562
164 E E -2.5034
165 E E -3.0682
166 K E -2.9703
167 P E -1.6073
168 T E -0.9390
169 S E -1.2053
170 A E -0.5877
171 P E -0.6472
172 S E -0.4505
173 S E -0.3757
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Laboratory of Theory of Biopolymers 2018