| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASQSVNAMGWFRQAPGKGRELVAAIVGSYTYSKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAASTNAVAALASIDDTSAYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.3587 | |
| 2 | V | C | -1.7778 | |
| 3 | Q | C | -1.3947 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 1.1295 | |
| 6 | E | C | 0.2129 | |
| 7 | S | C | -0.3598 | |
| 8 | G | C | -0.8703 | |
| 9 | G | C | -0.6105 | |
| 10 | G | C | 0.2630 | |
| 11 | L | C | 1.1003 | |
| 12 | V | C | -0.0317 | |
| 13 | Q | C | -1.3852 | |
| 14 | P | C | -1.8582 | |
| 15 | G | C | -1.4575 | |
| 16 | G | C | -1.1623 | |
| 17 | S | C | -1.2130 | |
| 18 | L | C | -0.8792 | |
| 19 | R | C | -1.8331 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.3341 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.4308 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -1.4228 | |
| 26 | Q | C | -1.9924 | |
| 27 | S | C | -1.6971 | |
| 28 | V | C | 0.0000 | |
| 29 | N | C | -1.6154 | |
| 30 | A | C | 0.0000 | |
| 31 | M | C | 0.0000 | |
| 32 | G | C | 0.0000 | |
| 33 | W | C | 0.0000 | |
| 34 | F | C | 0.0000 | |
| 35 | R | C | -1.2093 | |
| 36 | Q | C | -1.6711 | |
| 37 | A | C | -1.6474 | |
| 38 | P | C | -1.1740 | |
| 39 | G | C | -1.6372 | |
| 40 | K | C | -2.6777 | |
| 41 | G | C | -2.2071 | |
| 42 | R | C | -2.4092 | |
| 43 | E | C | -2.3297 | |
| 44 | L | C | 0.0000 | |
| 45 | V | C | 0.0000 | |
| 46 | A | C | 0.0000 | |
| 47 | A | C | 0.0000 | |
| 48 | I | C | 0.0000 | |
| 49 | V | C | 0.0000 | |
| 50 | G | C | -0.7246 | |
| 51 | S | C | -0.1721 | |
| 52 | Y | C | 0.9987 | |
| 53 | T | C | 0.4285 | |
| 54 | Y | C | 0.2284 | |
| 55 | S | C | -0.8028 | |
| 56 | K | C | -1.6033 | |
| 57 | G | C | -1.3651 | |
| 58 | R | C | -1.2926 | |
| 59 | F | C | 0.0000 | |
| 60 | T | C | -0.8509 | |
| 61 | I | C | 0.0000 | |
| 62 | S | C | -0.5794 | |
| 63 | R | C | -1.4947 | |
| 64 | D | C | -2.0612 | |
| 65 | N | C | -2.7762 | |
| 66 | A | C | -1.9533 | |
| 67 | K | C | -2.9662 | |
| 68 | R | C | -2.9976 | |
| 69 | M | C | -1.4681 | |
| 70 | V | C | 0.0000 | |
| 71 | Y | C | -0.5791 | |
| 72 | L | C | 0.0000 | |
| 73 | Q | C | -1.2677 | |
| 74 | M | C | 0.0000 | |
| 75 | N | C | -1.4200 | |
| 76 | S | C | -1.2481 | |
| 77 | L | C | 0.0000 | |
| 78 | R | C | -2.4440 | |
| 79 | A | C | -1.7701 | |
| 80 | E | C | -2.2677 | |
| 81 | D | C | 0.0000 | |
| 82 | T | C | -0.8140 | |
| 83 | A | C | 0.0000 | |
| 84 | V | C | -0.3607 | |
| 85 | Y | C | 0.0000 | |
| 86 | Y | C | -0.2718 | |
| 87 | C | C | 0.0000 | |
| 88 | A | C | 0.0000 | |
| 89 | A | C | 0.0000 | |
| 90 | S | C | 0.0000 | |
| 91 | T | C | -1.1338 | |
| 92 | N | C | -0.7933 | |
| 93 | A | C | 0.2604 | |
| 94 | V | C | 1.7571 | |
| 95 | A | C | 0.8140 | |
| 96 | A | C | 0.0000 | |
| 97 | L | C | 1.8048 | |
| 98 | A | C | 0.7634 | |
| 99 | S | C | -0.1167 | |
| 100 | I | C | -0.0211 | |
| 101 | D | C | -1.6164 | |
| 102 | D | C | -2.1717 | |
| 103 | T | C | -1.5314 | |
| 104 | S | C | -1.1559 | |
| 105 | A | C | 0.0000 | |
| 106 | Y | C | 0.0000 | |
| 107 | D | C | -2.0107 | |
| 108 | Y | C | -1.0375 | |
| 109 | W | C | -0.1938 | |
| 110 | G | C | -0.1434 | |
| 111 | Q | C | -0.9690 | |
| 112 | G | C | -0.4875 | |
| 113 | T | C | -0.5835 | |
| 114 | Q | C | -0.7914 | |
| 115 | V | C | 0.0000 | |
| 116 | T | C | -0.2216 | |
| 117 | V | C | 0.0000 | |
| 118 | S | C | -0.8243 | |
| 119 | S | C | -0.7117 |