Project name: Test

Status: done

Started: 2026-01-09 16:28:10
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Chain sequence(s) H: QVQLVESGGGPVEAGGSLRLSCAASGRSFSNSVMAWFRQAPGKEREFLSVLNWSSGRTSIADSVKGRFTMSRDPAKITVYLQMNGLKPEDTAVYYCAASNRGSLYTLDNQNRYEDWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-2.8934
Maximal score value
1.7619
Average score
-0.8167
Total score value
-102.8982

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.7688
2 V H -1.4861
3 Q H -1.4008
4 L H 0.0000
5 V H 0.8381
6 E H 0.0000
7 S H -0.4398
8 G H -0.9742
9 G H -0.8382
11 G H -0.6631
12 P H -0.7477
13 V H -1.1547
14 E H -2.3085
15 A H -2.0308
16 G H -1.5959
17 G H -1.3770
18 S H -1.3195
19 L H -0.9331
20 R H -1.7732
21 L H 0.0000
22 S H -0.3699
23 C H 0.0000
24 A H 0.0742
25 A H 0.0000
26 S H -1.0137
27 G H -1.5996
28 R H -1.7502
29 S H -1.1055
30 F H 0.0000
35 S H -1.0543
36 N H -1.8271
37 S H 0.0000
38 V H 0.0000
39 M H 0.0000
40 A H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.3947
45 A H -1.4597
46 P H -1.0944
47 G H -1.6939
48 K H -2.6827
49 E H -2.8934
50 R H -1.8485
51 E H -1.3829
52 F H -0.7774
53 L H 0.0000
54 S H 0.0000
55 V H 0.0000
56 L H 0.0000
57 N H -1.4142
58 W H 0.0000
59 S H -1.2074
62 S H -1.2621
63 G H -1.5281
64 R H -2.2552
65 T H -1.1271
66 S H -0.9320
67 I H -0.7861
68 A H -1.3359
69 D H -2.4907
70 S H -1.5236
71 V H 0.0000
72 K H -2.7032
74 G H -1.8872
75 R H -1.8293
76 F H 0.0000
77 T H -0.9231
78 M H 0.0000
79 S H -0.6922
80 R H -0.7776
81 D H -0.9991
82 P H -0.7834
83 A H -0.7711
84 K H -1.5437
85 I H -0.3050
86 T H 0.0000
87 V H 0.0000
88 Y H -0.5541
89 L H 0.0000
90 Q H -1.2267
91 M H 0.0000
92 N H -1.5431
93 G H -1.5166
94 L H 0.0000
95 K H -2.6614
96 P H -1.9911
97 E H -2.3325
98 D H 0.0000
99 T H -1.0508
100 A H 0.0000
101 V H -0.1121
102 Y H 0.0000
103 Y H 0.0218
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 S H 0.0000
108 N H -1.7771
109 R H -2.4373
110 G H -1.0501
111 S H -0.0045
111A L H 1.7619
111B Y H 0.8825
111C T H 0.1079
112C L H -0.2072
112B D H -1.2583
112A N H -1.5735
112 Q H -1.5246
113 N H -1.7865
114 R H 0.0000
115 Y H 0.0000
116 E H -1.3848
117 D H -0.7712
118 W H -0.2336
119 G H -0.2617
120 Q H -0.9543
121 G H 0.0000
122 T H 0.0000
123 Q H -0.8852
124 V H 0.0000
125 T H -0.9769
126 V H 0.0000
127 S H -1.4331
128 S H -1.2397
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Laboratory of Theory of Biopolymers 2018