| Chain sequence(s) |
I: MENVLTQSPAIMSASPGEKVTMTCSASSSVSYMHWYQQKSSTSPKLWIYDTSKLASGVPGRFSGSGSGNSYSLTISSMEAEDVATYYCFQGSGYPLTFGAGTKLELKGGGGSGGGGSGGGGSEVQLQQSGAELVRAGSSVKMSCKASGYTFTSYGINWVKQRPGQGLEWIGYINPGNGYTKYNEKFKGKTTLTVDKSSSTAYMQLRSLTSEDSAVYFCARKKSYAMDYWGQGTSVTVS
input PDB |
| Selected Chain(s) | I |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with I chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:11)
[INFO] Main: Simulation completed successfully. (00:02:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | I | 0.3947 | |
| 2 | E | I | -0.8468 | |
| 3 | N | I | 0.0913 | |
| 4 | V | I | 1.2638 | |
| 5 | L | I | 0.0000 | |
| 6 | T | I | 0.2489 | |
| 7 | Q | I | 0.0000 | |
| 8 | S | I | 0.0190 | |
| 9 | P | I | 0.3169 | |
| 10 | A | I | 0.6612 | |
| 11 | I | I | 1.2889 | |
| 12 | M | I | 0.4197 | |
| 13 | S | I | -0.5957 | |
| 14 | A | I | 0.0000 | |
| 15 | S | I | -1.9596 | |
| 16 | P | I | -1.8680 | |
| 17 | G | I | -1.9070 | |
| 18 | E | I | -2.5383 | |
| 19 | K | I | -2.5490 | |
| 20 | V | I | -1.0122 | |
| 21 | T | I | -0.3749 | |
| 22 | M | I | 0.0000 | |
| 23 | T | I | -0.2420 | |
| 24 | C | I | 0.0000 | |
| 25 | S | I | -0.3420 | |
| 26 | A | I | 0.0000 | |
| 27 | S | I | -0.1208 | |
| 28 | S | I | -0.4242 | |
| 29 | S | I | -0.6337 | |
| 30 | V | I | -0.2163 | |
| 31 | S | I | -0.1662 | |
| 32 | Y | I | 0.5840 | |
| 33 | M | I | 0.0000 | |
| 34 | H | I | 0.0000 | |
| 35 | W | I | 0.0000 | |
| 36 | Y | I | 0.0000 | |
| 37 | Q | I | 0.0000 | |
| 38 | Q | I | 0.0000 | |
| 39 | K | I | -1.2744 | |
| 40 | S | I | -0.6980 | |
| 41 | S | I | -0.6724 | |
| 42 | T | I | -0.8126 | |
| 43 | S | I | -0.5988 | |
| 44 | P | I | 0.0000 | |
| 45 | K | I | -0.4974 | |
| 46 | L | I | 0.0000 | |
| 47 | W | I | 0.0000 | |
| 48 | I | I | 0.0000 | |
| 49 | Y | I | 0.0753 | |
| 50 | D | I | -0.4315 | |
| 51 | T | I | -0.5611 | |
| 52 | S | I | -0.9664 | |
| 53 | K | I | -1.4054 | |
| 54 | L | I | -0.4107 | |
| 55 | A | I | 0.0000 | |
| 56 | S | I | -0.5680 | |
| 57 | G | I | -0.9410 | |
| 58 | V | I | 0.0000 | |
| 59 | P | I | -0.7105 | |
| 60 | G | I | -0.6314 | |
| 61 | R | I | -0.7853 | |
| 62 | F | I | 0.0000 | |
| 63 | S | I | -0.5777 | |
| 64 | G | I | 0.0000 | |
| 65 | S | I | -0.7767 | |
| 66 | G | I | -0.7458 | |
| 67 | S | I | -0.6899 | |
| 68 | G | I | -0.7337 | |
| 69 | N | I | -1.2623 | |
| 70 | S | I | -0.9227 | |
| 71 | Y | I | 0.0000 | |
| 72 | S | I | -0.3440 | |
| 73 | L | I | 0.0000 | |
| 74 | T | I | -0.4905 | |
| 75 | I | I | 0.0000 | |
| 76 | S | I | -1.5006 | |
| 77 | S | I | -1.4798 | |
| 78 | M | I | 0.0000 | |
| 79 | E | I | -1.9687 | |
| 80 | A | I | -1.8647 | |
| 81 | E | I | -2.2809 | |
| 82 | D | I | 0.0000 | |
| 83 | V | I | -0.9850 | |
| 84 | A | I | 0.0000 | |
| 85 | T | I | -0.4207 | |
| 86 | Y | I | 0.0000 | |
| 87 | Y | I | 0.0000 | |
| 88 | C | I | 0.0000 | |
| 89 | F | I | 0.0000 | |
| 90 | Q | I | 0.0000 | |
| 91 | G | I | 0.0000 | |
| 92 | S | I | 0.3772 | |
| 93 | G | I | 0.0855 | |
| 94 | Y | I | 0.4129 | |
| 95 | P | I | -0.3908 | |
| 96 | L | I | 0.0000 | |
| 97 | T | I | 0.0665 | |
| 98 | F | I | 0.0000 | |
| 99 | G | I | 0.0000 | |
| 100 | A | I | -0.0989 | |
| 101 | G | I | 0.0000 | |
| 102 | T | I | 0.0000 | |
| 103 | K | I | -0.3475 | |
| 104 | L | I | 0.0000 | |
| 105 | E | I | -1.6644 | |
| 106 | L | I | 0.0000 | |
| 107 | K | I | -2.3190 | |
| 108 | G | I | -1.9614 | |
| 109 | G | I | 0.0000 | |
| 110 | G | I | -1.5298 | |
| 111 | G | I | -1.1336 | |
| 112 | S | I | -1.1738 | |
| 113 | G | I | -1.6173 | |
| 114 | G | I | -1.3593 | |
| 115 | G | I | -1.3869 | |
| 116 | G | I | -1.3215 | |
| 117 | S | I | -1.1385 | |
| 118 | G | I | -1.3664 | |
| 119 | G | I | -1.4878 | |
| 120 | G | I | -1.3666 | |
| 121 | G | I | -1.2139 | |
| 122 | S | I | -1.5062 | |
| 123 | E | I | -2.0651 | |
| 124 | V | I | -0.9657 | |
| 125 | Q | I | -1.4019 | |
| 126 | L | I | 0.0000 | |
| 127 | Q | I | -1.7521 | |
| 128 | Q | I | -1.2605 | |
| 129 | S | I | -1.2238 | |
| 130 | G | I | -0.8356 | |
| 131 | A | I | -0.2799 | |
| 132 | E | I | -0.4391 | |
| 133 | L | I | 0.6971 | |
| 134 | V | I | -0.3376 | |
| 135 | R | I | -1.7014 | |
| 136 | A | I | -1.4044 | |
| 137 | G | I | -1.3184 | |
| 138 | S | I | -1.2201 | |
| 139 | S | I | -1.6188 | |
| 140 | V | I | 0.0000 | |
| 141 | K | I | -2.1154 | |
| 142 | M | I | 0.0000 | |
| 143 | S | I | -0.9257 | |
| 144 | C | I | 0.0000 | |
| 145 | K | I | -1.7310 | |
| 146 | A | I | 0.0000 | |
| 147 | S | I | -1.1175 | |
| 148 | G | I | -0.9958 | |
| 149 | Y | I | -0.3740 | |
| 150 | T | I | -0.1001 | |
| 151 | F | I | 0.0000 | |
| 152 | T | I | -1.0169 | |
| 153 | S | I | -0.7856 | |
| 154 | Y | I | -0.7747 | |
| 155 | G | I | 0.0000 | |
| 156 | I | I | 0.0000 | |
| 157 | N | I | 0.0000 | |
| 158 | W | I | 0.0000 | |
| 159 | V | I | 0.0000 | |
| 160 | K | I | 0.0000 | |
| 161 | Q | I | -0.6166 | |
| 162 | R | I | -1.1784 | |
| 163 | P | I | -0.8464 | |
| 164 | G | I | -1.2145 | |
| 165 | Q | I | -1.1364 | |
| 166 | G | I | -0.8477 | |
| 167 | L | I | 0.0000 | |
| 168 | E | I | -0.6784 | |
| 169 | W | I | 0.0000 | |
| 170 | I | I | 0.0000 | |
| 171 | G | I | 0.0000 | |
| 172 | Y | I | 0.0334 | |
| 173 | I | I | 0.0000 | |
| 174 | N | I | -0.8865 | |
| 175 | P | I | 0.0000 | |
| 176 | G | I | -1.3166 | |
| 177 | N | I | -1.4621 | |
| 178 | G | I | -0.9933 | |
| 179 | Y | I | -0.0742 | |
| 180 | T | I | -0.1517 | |
| 181 | K | I | -0.5624 | |
| 182 | Y | I | -1.2236 | |
| 183 | N | I | 0.0000 | |
| 184 | E | I | -3.2865 | |
| 185 | K | I | -3.1742 | |
| 186 | F | I | 0.0000 | |
| 187 | K | I | -3.2242 | |
| 188 | G | I | -2.1813 | |
| 189 | K | I | -2.1662 | |
| 190 | T | I | 0.0000 | |
| 191 | T | I | -1.0404 | |
| 192 | L | I | 0.0000 | |
| 193 | T | I | 0.0063 | |
| 194 | V | I | -0.7713 | |
| 195 | D | I | -1.5638 | |
| 196 | K | I | -2.1745 | |
| 197 | S | I | -1.2479 | |
| 198 | S | I | -1.1294 | |
| 199 | S | I | -1.2558 | |
| 200 | T | I | 0.0000 | |
| 201 | A | I | 0.0000 | |
| 202 | Y | I | -0.4804 | |
| 203 | M | I | 0.0000 | |
| 204 | Q | I | -1.5205 | |
| 205 | L | I | 0.0000 | |
| 206 | R | I | -2.1674 | |
| 207 | S | I | -1.4153 | |
| 208 | L | I | 0.0000 | |
| 209 | T | I | -1.3754 | |
| 210 | S | I | -1.4503 | |
| 211 | E | I | -2.0507 | |
| 212 | D | I | 0.0000 | |
| 213 | S | I | -0.6829 | |
| 214 | A | I | 0.0000 | |
| 215 | V | I | 0.0779 | |
| 216 | Y | I | 0.0000 | |
| 217 | F | I | 0.0000 | |
| 218 | C | I | 0.0000 | |
| 219 | A | I | 0.0000 | |
| 220 | R | I | 0.0000 | |
| 221 | K | I | 0.0000 | |
| 222 | K | I | -1.6112 | |
| 223 | S | I | -0.4825 | |
| 224 | Y | I | 0.5629 | |
| 225 | A | I | 0.0000 | |
| 226 | M | I | 0.0000 | |
| 227 | D | I | -0.2549 | |
| 228 | Y | I | 0.1536 | |
| 229 | W | I | -0.2431 | |
| 230 | G | I | 0.0000 | |
| 231 | Q | I | -1.3556 | |
| 232 | G | I | -0.7468 | |
| 233 | T | I | 0.0000 | |
| 234 | S | I | -0.1879 | |
| 235 | V | I | 0.0000 | |
| 236 | T | I | -0.2539 | |
| 237 | V | I | 0.0000 | |
| 238 | S | I | -0.5918 |