| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFPIRYIETLIWGEAIWLDVPGSERSYDLTGLKPGTEYVVVIDGVKGGDHSKPLVATFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4265 | |
| 2 | L | A | -0.3640 | |
| 3 | P | A | -0.5563 | |
| 4 | A | A | -1.1943 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.3142 | |
| 7 | N | A | -1.3878 | |
| 8 | L | A | 0.1205 | |
| 9 | V | A | 1.1019 | |
| 10 | V | A | 0.3015 | |
| 11 | S | A | -0.6225 | |
| 12 | R | A | -2.0177 | |
| 13 | V | A | -1.0492 | |
| 14 | T | A | -1.7981 | |
| 15 | E | A | -3.0775 | |
| 16 | D | A | -2.7863 | |
| 17 | S | A | -2.1148 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2252 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4379 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.3633 | |
| 24 | A | A | -1.4624 | |
| 25 | P | A | -1.3996 | |
| 26 | D | A | -2.2963 | |
| 27 | A | A | -1.4034 | |
| 28 | A | A | 0.0000 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.7319 | |
| 31 | S | A | -1.8905 | |
| 32 | F | A | 0.0000 | |
| 33 | P | A | -0.8989 | |
| 34 | I | A | 0.0000 | |
| 35 | R | A | 0.0068 | |
| 36 | Y | A | 0.4647 | |
| 37 | I | A | 0.5708 | |
| 38 | E | A | 0.4700 | |
| 39 | T | A | 1.2812 | |
| 40 | L | A | 2.5244 | |
| 41 | I | A | 2.8692 | |
| 42 | W | A | 2.0927 | |
| 43 | G | A | 0.8205 | |
| 44 | E | A | -0.9476 | |
| 45 | A | A | -0.0129 | |
| 46 | I | A | 0.9234 | |
| 47 | W | A | 0.9350 | |
| 48 | L | A | 0.0500 | |
| 49 | D | A | -1.4840 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.5741 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6982 | |
| 54 | E | A | -1.9003 | |
| 55 | R | A | -1.2498 | |
| 56 | S | A | -0.7642 | |
| 57 | Y | A | -1.0029 | |
| 58 | D | A | -1.7510 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3882 | |
| 61 | G | A | -1.5217 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0193 | |
| 64 | P | A | -2.5812 | |
| 65 | G | A | -1.8102 | |
| 66 | T | A | -1.2890 | |
| 67 | E | A | -0.8475 | |
| 68 | Y | A | 0.0000 | |
| 69 | V | A | 0.3746 | |
| 70 | V | A | 0.0000 | |
| 71 | V | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | D | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -2.2103 | |
| 76 | K | A | -2.4279 | |
| 77 | G | A | -2.0503 | |
| 78 | G | A | -2.1981 | |
| 79 | D | A | -2.7994 | |
| 80 | H | A | -2.3514 | |
| 81 | S | A | 0.0000 | |
| 82 | K | A | -1.7334 | |
| 83 | P | A | -0.8112 | |
| 84 | L | A | 0.2046 | |
| 85 | V | A | 1.7429 | |
| 86 | A | A | 1.2466 | |
| 87 | T | A | 0.4606 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.0835 | |
| 90 | T | A | -1.8890 |