| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFAFSSYMGWFRQAPGKGRELVAAWFDGTKYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCDRGIGARRGPYYMDVWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0586 | |
| 2 | V | A | -1.0989 | |
| 3 | Q | A | -1.1577 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2246 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5406 | |
| 8 | G | A | -1.1723 | |
| 9 | G | A | -0.8292 | |
| 10 | G | A | -0.1160 | |
| 11 | L | A | 0.9267 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4302 | |
| 14 | P | A | -1.6610 | |
| 15 | G | A | -1.4342 | |
| 16 | G | A | -1.0156 | |
| 17 | S | A | -1.3579 | |
| 18 | L | A | -1.1274 | |
| 19 | R | A | -2.2563 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3786 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1018 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.9121 | |
| 26 | G | A | -1.1014 | |
| 27 | F | A | -0.4342 | |
| 28 | A | A | -0.1307 | |
| 29 | F | A | -0.7337 | |
| 30 | S | A | -0.7776 | |
| 31 | S | A | -0.2878 | |
| 32 | Y | A | 0.0000 | |
| 33 | M | A | 0.0000 | |
| 34 | G | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | 0.0176 | |
| 37 | R | A | 0.0000 | |
| 38 | Q | A | -1.5296 | |
| 39 | A | A | -1.6235 | |
| 40 | P | A | -1.1710 | |
| 41 | G | A | -1.6321 | |
| 42 | K | A | -2.5642 | |
| 43 | G | A | -2.1623 | |
| 44 | R | A | -1.9602 | |
| 45 | E | A | -1.1565 | |
| 46 | L | A | 0.1305 | |
| 47 | V | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | W | A | -0.4959 | |
| 51 | F | A | -1.1169 | |
| 52 | D | A | -2.2312 | |
| 53 | G | A | -1.4957 | |
| 54 | T | A | -0.9725 | |
| 55 | K | A | -0.7961 | |
| 56 | Y | A | -0.0689 | |
| 57 | Y | A | -0.7198 | |
| 58 | P | A | -1.2494 | |
| 59 | D | A | -2.5331 | |
| 60 | S | A | -1.5759 | |
| 61 | V | A | 0.0000 | |
| 62 | E | A | -2.6648 | |
| 63 | G | A | -1.7885 | |
| 64 | R | A | -1.5339 | |
| 65 | F | A | 0.0000 | |
| 66 | T | A | -0.9758 | |
| 67 | I | A | 0.0000 | |
| 68 | S | A | -0.5860 | |
| 69 | R | A | -1.1479 | |
| 70 | D | A | -1.8152 | |
| 71 | N | A | -2.3566 | |
| 72 | A | A | -1.7670 | |
| 73 | K | A | -2.6240 | |
| 74 | R | A | -2.2864 | |
| 75 | M | A | -1.1309 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | -0.5959 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -1.5277 | |
| 80 | M | A | 0.0000 | |
| 81 | N | A | -1.4583 | |
| 82 | S | A | -1.2409 | |
| 83 | L | A | 0.0000 | |
| 84 | R | A | -2.3100 | |
| 85 | A | A | -1.7446 | |
| 86 | E | A | -2.2233 | |
| 87 | D | A | 0.0000 | |
| 88 | T | A | -0.8723 | |
| 89 | A | A | 0.0000 | |
| 90 | V | A | -0.4311 | |
| 91 | Y | A | 0.0000 | |
| 92 | Y | A | -0.0775 | |
| 93 | C | A | 0.0000 | |
| 94 | D | A | 0.0000 | |
| 95 | R | A | 0.2097 | |
| 96 | G | A | 0.0000 | |
| 97 | I | A | 1.9281 | |
| 98 | G | A | 0.4646 | |
| 99 | A | A | -0.9327 | |
| 100 | R | A | -2.7988 | |
| 101 | R | A | -2.7356 | |
| 102 | G | A | -1.2680 | |
| 103 | P | A | 0.1172 | |
| 104 | Y | A | 1.4835 | |
| 105 | Y | A | 2.1961 | |
| 106 | M | A | 1.2793 | |
| 107 | D | A | 0.5388 | |
| 108 | V | A | 0.3268 | |
| 109 | W | A | 0.1571 | |
| 110 | G | A | -0.0706 | |
| 111 | Q | A | -0.8361 | |
| 112 | G | A | -0.4486 | |
| 113 | T | A | -0.6656 | |
| 114 | Q | A | -0.9900 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.3412 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -0.8094 | |
| 119 | S | A | -0.5380 |