| Chain sequence(s) |
A: YDNREIVMKYIHYKLSQRGYEWDASEVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYGP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:18)
[INFO] Main: Simulation completed successfully. (00:02:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 7 | Y | A | -0.1813 | |
| 8 | D | A | -1.7773 | |
| 9 | N | A | 0.0000 | |
| 10 | R | A | -1.8917 | |
| 11 | E | A | -1.8942 | |
| 12 | I | A | 0.0000 | |
| 13 | V | A | 0.0000 | |
| 14 | M | A | -1.0325 | |
| 15 | K | A | -1.2519 | |
| 16 | Y | A | 0.0000 | |
| 17 | I | A | 0.0000 | |
| 18 | H | A | -1.0033 | |
| 19 | Y | A | -0.5889 | |
| 20 | K | A | -1.0588 | |
| 21 | L | A | 0.0000 | |
| 22 | S | A | -1.7885 | |
| 23 | Q | A | -2.3361 | |
| 24 | R | A | -2.7865 | |
| 25 | G | A | -2.0528 | |
| 26 | Y | A | -1.7467 | |
| 27 | E | A | -2.6224 | |
| 28 | W | A | 0.0000 | |
| 29 | D | A | -2.4227 | |
| 30 | A | A | -1.6342 | |
| 87 | S | A | -0.9465 | |
| 88 | E | A | -1.3339 | |
| 89 | V | A | -0.0759 | |
| 90 | V | A | 0.0000 | |
| 91 | H | A | -0.4045 | |
| 92 | L | A | 0.4291 | |
| 93 | T | A | 0.0000 | |
| 94 | L | A | 0.0000 | |
| 95 | R | A | -1.0782 | |
| 96 | Q | A | -1.6692 | |
| 97 | A | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | D | A | -2.8385 | |
| 100 | D | A | 0.0000 | |
| 101 | F | A | -1.8957 | |
| 102 | S | A | 0.0000 | |
| 103 | R | A | -3.7351 | |
| 104 | R | A | -3.2324 | |
| 105 | Y | A | -2.1724 | |
| 106 | R | A | -3.8403 | |
| 107 | R | A | -3.8811 | |
| 108 | D | A | -3.3783 | |
| 109 | F | A | -2.2080 | |
| 110 | A | A | -2.2288 | |
| 111 | E | A | -2.6251 | |
| 112 | M | A | -1.6604 | |
| 113 | S | A | -1.2120 | |
| 114 | S | A | -1.1619 | |
| 115 | Q | A | -1.6278 | |
| 116 | L | A | 0.0000 | |
| 117 | H | A | -1.4984 | |
| 118 | L | A | 0.0000 | |
| 119 | T | A | -0.2959 | |
| 120 | P | A | 0.2146 | |
| 121 | F | A | 1.3412 | |
| 122 | T | A | -0.1643 | |
| 123 | A | A | 0.0000 | |
| 124 | R | A | -2.0260 | |
| 125 | G | A | -1.2646 | |
| 126 | R | A | -1.1696 | |
| 127 | F | A | 0.0000 | |
| 128 | A | A | -1.3196 | |
| 129 | T | A | -1.4014 | |
| 130 | V | A | -1.1794 | |
| 131 | V | A | 0.0000 | |
| 132 | E | A | -2.9721 | |
| 133 | E | A | -3.1901 | |
| 134 | L | A | -1.9920 | |
| 135 | F | A | 0.0000 | |
| 136 | R | A | -3.6731 | |
| 137 | D | A | -3.2315 | |
| 138 | G | A | -1.9129 | |
| 139 | V | A | -1.0928 | |
| 140 | N | A | -1.2920 | |
| 141 | W | A | -0.4644 | |
| 142 | G | A | -0.8728 | |
| 143 | R | A | -0.9308 | |
| 144 | I | A | 0.0000 | |
| 145 | V | A | 0.0000 | |
| 146 | A | A | -0.3074 | |
| 147 | F | A | 0.0000 | |
| 148 | F | A | 0.0000 | |
| 149 | E | A | 0.0000 | |
| 150 | F | A | 0.0000 | |
| 151 | G | A | 0.0000 | |
| 152 | G | A | 0.0000 | |
| 153 | V | A | 0.0000 | |
| 154 | M | A | 0.0000 | |
| 155 | C | A | 0.0000 | |
| 156 | V | A | -0.7437 | |
| 157 | E | A | -1.1909 | |
| 158 | S | A | 0.0000 | |
| 159 | V | A | -1.4541 | |
| 160 | N | A | -2.3544 | |
| 161 | R | A | -2.3697 | |
| 162 | E | A | -2.5162 | |
| 163 | M | A | -1.3045 | |
| 164 | S | A | -1.2528 | |
| 165 | P | A | -1.1273 | |
| 166 | L | A | 0.0000 | |
| 167 | V | A | 0.0000 | |
| 168 | D | A | -2.2147 | |
| 169 | N | A | -1.7161 | |
| 170 | I | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | L | A | -0.1736 | |
| 173 | W | A | -0.7415 | |
| 174 | M | A | 0.0000 | |
| 175 | T | A | -1.5570 | |
| 176 | E | A | -2.3417 | |
| 177 | Y | A | -1.6472 | |
| 178 | L | A | 0.0000 | |
| 179 | N | A | -2.6702 | |
| 180 | R | A | -3.1073 | |
| 181 | H | A | -2.2807 | |
| 182 | L | A | 0.0000 | |
| 183 | H | A | -1.9987 | |
| 184 | T | A | -1.7364 | |
| 185 | W | A | -1.3636 | |
| 186 | I | A | 0.0000 | |
| 187 | Q | A | -2.5394 | |
| 188 | D | A | -2.8111 | |
| 189 | N | A | -2.4096 | |
| 190 | G | A | -2.1520 | |
| 191 | G | A | -1.6733 | |
| 192 | W | A | 0.0000 | |
| 193 | D | A | -1.9901 | |
| 194 | A | A | -1.4514 | |
| 195 | F | A | 0.0000 | |
| 196 | V | A | 0.0000 | |
| 197 | E | A | -1.6150 | |
| 198 | L | A | 0.4244 | |
| 199 | Y | A | 0.0961 | |
| 200 | G | A | -0.5734 | |
| 201 | P | A | -0.8084 |