| Chain sequence(s) |
A: GSNSVLDHIDVLRDNGTVVFSVQPYYLDIYTCKEAILFTTSFYKDLDKSSITKINEDIEKFNEEIIKNEEQCLVGGKTDFDNLLIVLENAEKANVRKTLFDNTFNDYKNKKSSFYNCLKNKKNDYDKKIKNIKNEITKLLKNIESTGNMCKTESYVMNNNLYLLRVNEVKSTPIDLYLNRAKELLESSSKLVNPIKMKLGDNKNMYSIGYIHDEIKDIIKRYNFHLKHIEKGKEYIKRITQANNIADKMKKDELIKKIFESSKHFASFKYSNEMISKLDSLFIKNEEILNNLFNNIFNIFKKKYETYVDMKTIESKYTTVMTLSEHLLEYAMDVLKANPQKPIDPKANLDSEVVKLQIKINEKSNELDNAISQVKTLIIIMKSFYDIIISEKASMDEMEKKELSLNNYIEKTDYILQTYNIFKSKSNIINNNSKNISSKYITIEGLKNDIDELNSLISYFKDSQETLIKD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:13:52)
[INFO] Main: Simulation completed successfully. (00:13:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7309 | |
| 2 | S | A | -0.8488 | |
| 3 | N | A | -1.1249 | |
| 4 | S | A | -0.7670 | |
| 5 | V | A | 0.0000 | |
| 6 | L | A | -0.3129 | |
| 7 | D | A | 0.0000 | |
| 8 | H | A | 0.0000 | |
| 9 | I | A | 0.0000 | |
| 10 | D | A | 0.0000 | |
| 11 | V | A | -0.1111 | |
| 12 | L | A | -0.9758 | |
| 13 | R | A | -2.3432 | |
| 14 | D | A | -3.0151 | |
| 15 | N | A | -2.6595 | |
| 16 | G | A | -1.9424 | |
| 17 | T | A | -1.0954 | |
| 18 | V | A | 0.0000 | |
| 19 | V | A | -0.2404 | |
| 20 | F | A | -0.0242 | |
| 21 | S | A | 0.0000 | |
| 22 | V | A | 0.0000 | |
| 23 | Q | A | -0.2962 | |
| 24 | P | A | -0.3297 | |
| 25 | Y | A | 0.0873 | |
| 26 | Y | A | -0.0590 | |
| 27 | L | A | -0.3656 | |
| 28 | D | A | -1.2533 | |
| 29 | I | A | 0.0000 | |
| 30 | Y | A | -0.5022 | |
| 31 | T | A | 0.0000 | |
| 32 | C | A | 0.0000 | |
| 33 | K | A | -0.6604 | |
| 34 | E | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | I | A | 0.0000 | |
| 37 | L | A | 1.2572 | |
| 38 | F | A | 0.0000 | |
| 39 | T | A | 0.0000 | |
| 40 | T | A | -0.5577 | |
| 41 | S | A | 0.0815 | |
| 42 | F | A | -0.2884 | |
| 43 | Y | A | -1.5017 | |
| 44 | K | A | -2.9714 | |
| 45 | D | A | -3.6749 | |
| 46 | L | A | 0.0000 | |
| 47 | D | A | -3.5170 | |
| 48 | K | A | -3.4387 | |
| 49 | S | A | -2.0484 | |
| 50 | S | A | -2.4258 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | -2.3468 | |
| 53 | K | A | -3.3176 | |
| 54 | I | A | 0.0000 | |
| 55 | N | A | -2.8222 | |
| 56 | E | A | -4.0039 | |
| 57 | D | A | -3.9684 | |
| 58 | I | A | 0.0000 | |
| 59 | E | A | -4.5774 | |
| 60 | K | A | -4.3488 | |
| 61 | F | A | 0.0000 | |
| 62 | N | A | -3.0137 | |
| 63 | E | A | -3.8973 | |
| 64 | E | A | -3.4212 | |
| 65 | I | A | 0.0000 | |
| 66 | I | A | -2.0924 | |
| 67 | K | A | -3.2602 | |
| 68 | N | A | -2.3808 | |
| 69 | E | A | 0.0000 | |
| 70 | E | A | -2.8134 | |
| 71 | Q | A | -2.1481 | |
| 72 | C | A | 0.0000 | |
| 73 | L | A | 0.0000 | |
| 74 | V | A | 0.4011 | |
| 75 | G | A | -0.6415 | |
| 76 | G | A | -1.2556 | |
| 77 | K | A | -1.7285 | |
| 78 | T | A | -1.7461 | |
| 79 | D | A | -1.9551 | |
| 80 | F | A | 0.0000 | |
| 81 | D | A | -2.1070 | |
| 82 | N | A | -1.8710 | |
| 83 | L | A | -1.0288 | |
| 84 | L | A | -0.5080 | |
| 85 | I | A | -0.3179 | |
| 86 | V | A | -0.5910 | |
| 87 | L | A | 0.0000 | |
| 88 | E | A | -0.7161 | |
| 89 | N | A | -1.6371 | |
| 90 | A | A | 0.0000 | |
| 91 | E | A | -3.2056 | |
| 92 | K | A | -2.8621 | |
| 93 | A | A | -2.0823 | |
| 94 | N | A | -2.8481 | |
| 95 | V | A | 0.0000 | |
| 96 | R | A | -2.9052 | |
| 97 | K | A | -2.4288 | |
| 98 | T | A | -1.2408 | |
| 99 | L | A | -1.0826 | |
| 100 | F | A | 0.0000 | |
| 101 | D | A | -2.0294 | |
| 102 | N | A | -2.4433 | |
| 103 | T | A | 0.0000 | |
| 104 | F | A | -1.8811 | |
| 105 | N | A | -3.3766 | |
| 106 | D | A | -3.5847 | |
| 107 | Y | A | 0.0000 | |
| 108 | K | A | -3.1221 | |
| 109 | N | A | -2.9922 | |
| 110 | K | A | -1.9036 | |
| 111 | K | A | -1.4385 | |
| 112 | S | A | -1.3835 | |
| 113 | S | A | -0.9215 | |
| 114 | F | A | 0.0000 | |
| 115 | Y | A | -0.9274 | |
| 116 | N | A | -1.8587 | |
| 117 | C | A | -1.3958 | |
| 118 | L | A | 0.0000 | |
| 119 | K | A | -3.1429 | |
| 120 | N | A | -3.1247 | |
| 121 | K | A | -2.8266 | |
| 122 | K | A | -3.3447 | |
| 123 | N | A | -3.6982 | |
| 124 | D | A | -4.0647 | |
| 125 | Y | A | 0.0000 | |
| 126 | D | A | -3.3001 | |
| 127 | K | A | -4.1771 | |
| 128 | K | A | -3.6620 | |
| 129 | I | A | 0.0000 | |
| 130 | K | A | -4.1864 | |
| 131 | N | A | -3.8251 | |
| 132 | I | A | 0.0000 | |
| 133 | K | A | -3.1685 | |
| 134 | N | A | -3.2462 | |
| 135 | E | A | -3.3716 | |
| 136 | I | A | 0.0000 | |
| 137 | T | A | -2.5952 | |
| 138 | K | A | -2.8395 | |
| 139 | L | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | -2.9597 | |
| 142 | N | A | -3.0738 | |
| 143 | I | A | 0.0000 | |
| 144 | E | A | -2.9500 | |
| 145 | S | A | -2.1292 | |
| 146 | T | A | -1.2658 | |
| 147 | G | A | -1.3067 | |
| 148 | N | A | -2.3259 | |
| 149 | M | A | -2.1007 | |
| 150 | C | A | 0.0000 | |
| 151 | K | A | -2.9248 | |
| 152 | T | A | 0.0000 | |
| 153 | E | A | -2.2359 | |
| 154 | S | A | -0.6683 | |
| 155 | Y | A | 0.0000 | |
| 156 | V | A | -0.0431 | |
| 157 | M | A | 0.3708 | |
| 158 | N | A | 0.0000 | |
| 159 | N | A | 0.0000 | |
| 160 | N | A | 0.1349 | |
| 161 | L | A | 0.5384 | |
| 162 | Y | A | 0.0000 | |
| 163 | L | A | -0.5906 | |
| 164 | L | A | 0.1872 | |
| 165 | R | A | -1.3950 | |
| 166 | V | A | 0.0000 | |
| 167 | N | A | -2.2946 | |
| 168 | E | A | -2.7397 | |
| 169 | V | A | -2.1061 | |
| 170 | K | A | -2.6147 | |
| 171 | S | A | -1.7571 | |
| 172 | T | A | -0.8466 | |
| 173 | P | A | -0.6019 | |
| 174 | I | A | 0.0000 | |
| 175 | D | A | -1.2865 | |
| 176 | L | A | 0.1643 | |
| 177 | Y | A | -0.4279 | |
| 178 | L | A | 0.0000 | |
| 179 | N | A | -1.7271 | |
| 180 | R | A | -2.2368 | |
| 181 | A | A | 0.0000 | |
| 182 | K | A | -3.0647 | |
| 183 | E | A | -3.3905 | |
| 184 | L | A | -2.0799 | |
| 185 | L | A | -2.5036 | |
| 186 | E | A | -3.2333 | |
| 187 | S | A | -2.2916 | |
| 188 | S | A | 0.0000 | |
| 189 | S | A | -1.8380 | |
| 190 | K | A | -2.4959 | |
| 191 | L | A | 0.0000 | |
| 192 | V | A | -1.1447 | |
| 193 | N | A | -1.8429 | |
| 194 | P | A | -1.3750 | |
| 195 | I | A | 0.0000 | |
| 196 | K | A | -1.8709 | |
| 197 | M | A | -0.5623 | |
| 198 | K | A | -1.1463 | |
| 199 | L | A | -1.0591 | |
| 200 | G | A | -1.7599 | |
| 201 | D | A | -2.6571 | |
| 202 | N | A | -2.0696 | |
| 203 | K | A | -2.4949 | |
| 204 | N | A | 0.0000 | |
| 205 | M | A | 0.0000 | |
| 206 | Y | A | -1.1257 | |
| 207 | S | A | 0.0000 | |
| 208 | I | A | 0.0000 | |
| 209 | G | A | -0.5109 | |
| 210 | Y | A | 0.0000 | |
| 211 | I | A | 0.0000 | |
| 212 | H | A | 0.0000 | |
| 213 | D | A | -1.9294 | |
| 214 | E | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | K | A | -3.0952 | |
| 217 | D | A | -2.8231 | |
| 218 | I | A | 0.0000 | |
| 219 | I | A | -2.0635 | |
| 220 | K | A | -2.4691 | |
| 221 | R | A | 0.0000 | |
| 222 | Y | A | 0.0000 | |
| 223 | N | A | -1.3523 | |
| 224 | F | A | 0.0000 | |
| 225 | H | A | 0.0000 | |
| 226 | L | A | -1.6038 | |
| 227 | K | A | -2.3813 | |
| 228 | H | A | -2.2906 | |
| 229 | I | A | 0.0000 | |
| 230 | E | A | -3.5110 | |
| 231 | K | A | -3.4976 | |
| 232 | G | A | 0.0000 | |
| 233 | K | A | -2.9432 | |
| 234 | E | A | -3.0971 | |
| 235 | Y | A | -2.3258 | |
| 236 | I | A | 0.0000 | |
| 237 | K | A | -2.4321 | |
| 238 | R | A | -2.8282 | |
| 239 | I | A | -1.5080 | |
| 240 | T | A | -1.3180 | |
| 241 | Q | A | -2.3915 | |
| 242 | A | A | -1.9385 | |
| 243 | N | A | -2.2012 | |
| 244 | N | A | -1.8919 | |
| 245 | I | A | -1.0507 | |
| 246 | A | A | -1.7240 | |
| 247 | D | A | -2.8785 | |
| 248 | K | A | -2.7507 | |
| 249 | M | A | 0.0000 | |
| 250 | K | A | -2.6999 | |
| 251 | K | A | -3.3244 | |
| 252 | D | A | -3.2888 | |
| 253 | E | A | -3.2316 | |
| 254 | L | A | 0.0000 | |
| 255 | I | A | 0.0000 | |
| 256 | K | A | -3.4547 | |
| 257 | K | A | -2.8710 | |
| 258 | I | A | 0.0000 | |
| 259 | F | A | 0.0000 | |
| 260 | E | A | -2.5046 | |
| 261 | S | A | 0.0000 | |
| 262 | S | A | 0.0000 | |
| 263 | K | A | -1.7878 | |
| 264 | H | A | -1.5056 | |
| 265 | F | A | 0.0000 | |
| 266 | A | A | 0.0000 | |
| 267 | S | A | 0.0000 | |
| 268 | F | A | 0.0000 | |
| 269 | K | A | -1.3006 | |
| 270 | Y | A | 0.0000 | |
| 271 | S | A | 0.0000 | |
| 272 | N | A | -1.3610 | |
| 273 | E | A | -1.6556 | |
| 274 | M | A | 0.0000 | |
| 275 | I | A | 0.0000 | |
| 276 | S | A | -1.2650 | |
| 277 | K | A | -1.6599 | |
| 278 | L | A | 0.0000 | |
| 279 | D | A | -0.5820 | |
| 280 | S | A | -0.6365 | |
| 281 | L | A | 0.0000 | |
| 282 | F | A | 0.0000 | |
| 283 | I | A | -0.0808 | |
| 284 | K | A | -0.9717 | |
| 285 | N | A | 0.0000 | |
| 286 | E | A | -1.3511 | |
| 287 | E | A | -2.2408 | |
| 288 | I | A | -1.4935 | |
| 289 | L | A | 0.0000 | |
| 290 | N | A | -1.6558 | |
| 291 | N | A | -1.9739 | |
| 292 | L | A | 0.0000 | |
| 293 | F | A | 0.0000 | |
| 294 | N | A | -0.8738 | |
| 295 | N | A | -0.9578 | |
| 296 | I | A | 0.0000 | |
| 297 | F | A | 0.0000 | |
| 298 | N | A | -1.0691 | |
| 299 | I | A | -0.7097 | |
| 300 | F | A | 0.0000 | |
| 301 | K | A | -2.0505 | |
| 302 | K | A | -2.8791 | |
| 303 | K | A | -2.2527 | |
| 304 | Y | A | 0.0000 | |
| 305 | E | A | -3.2264 | |
| 306 | T | A | -2.0254 | |
| 307 | Y | A | -1.6408 | |
| 308 | V | A | 0.0000 | |
| 309 | D | A | -2.7832 | |
| 310 | M | A | -2.1966 | |
| 311 | K | A | -2.6331 | |
| 312 | T | A | -2.0653 | |
| 313 | I | A | -1.8660 | |
| 314 | E | A | -2.0553 | |
| 315 | S | A | -1.7307 | |
| 316 | K | A | -2.1483 | |
| 317 | Y | A | 0.0000 | |
| 318 | T | A | -0.7922 | |
| 319 | T | A | -0.5687 | |
| 320 | V | A | -0.1526 | |
| 321 | M | A | -0.2249 | |
| 322 | T | A | -0.2126 | |
| 323 | L | A | 0.0472 | |
| 324 | S | A | 0.0000 | |
| 325 | E | A | -2.1309 | |
| 326 | H | A | -1.7198 | |
| 327 | L | A | -1.4441 | |
| 328 | L | A | 0.0000 | |
| 329 | E | A | -2.5235 | |
| 330 | Y | A | -1.5227 | |
| 331 | A | A | 0.0000 | |
| 332 | M | A | -1.5604 | |
| 333 | D | A | -2.3500 | |
| 334 | V | A | 0.0000 | |
| 335 | L | A | -1.7587 | |
| 336 | K | A | -2.2161 | |
| 337 | A | A | -1.3237 | |
| 338 | N | A | 0.0000 | |
| 339 | P | A | -1.6433 | |
| 340 | Q | A | -2.2018 | |
| 341 | K | A | -1.3498 | |
| 342 | P | A | -0.6797 | |
| 343 | I | A | 0.0076 | |
| 344 | D | A | -1.7683 | |
| 345 | P | A | -1.5171 | |
| 346 | K | A | -2.3370 | |
| 347 | A | A | -1.6964 | |
| 348 | N | A | -2.0254 | |
| 349 | L | A | -0.9626 | |
| 350 | D | A | -2.0812 | |
| 351 | S | A | -1.9798 | |
| 352 | E | A | -2.1117 | |
| 353 | V | A | 0.0000 | |
| 354 | V | A | -0.8787 | |
| 355 | K | A | -1.7956 | |
| 356 | L | A | -1.1086 | |
| 357 | Q | A | 0.0000 | |
| 358 | I | A | -0.5842 | |
| 359 | K | A | -1.6198 | |
| 360 | I | A | 0.0000 | |
| 361 | N | A | -2.3265 | |
| 362 | E | A | -3.3187 | |
| 363 | K | A | -3.1223 | |
| 364 | S | A | 0.0000 | |
| 365 | N | A | -4.0456 | |
| 366 | E | A | -4.1161 | |
| 367 | L | A | 0.0000 | |
| 368 | D | A | -3.2930 | |
| 369 | N | A | -3.2538 | |
| 370 | A | A | 0.0000 | |
| 371 | I | A | 0.0000 | |
| 372 | S | A | -1.7701 | |
| 373 | Q | A | -1.2897 | |
| 374 | V | A | 0.0000 | |
| 375 | K | A | -1.1101 | |
| 376 | T | A | -0.0290 | |
| 377 | L | A | 0.0000 | |
| 378 | I | A | 0.0000 | |
| 379 | I | A | 1.6183 | |
| 380 | I | A | 1.0126 | |
| 381 | M | A | 0.0000 | |
| 382 | K | A | -0.3159 | |
| 383 | S | A | 0.0999 | |
| 384 | F | A | 0.0267 | |
| 385 | Y | A | -0.1579 | |
| 386 | D | A | -0.6166 | |
| 387 | I | A | 0.5924 | |
| 388 | I | A | 0.0000 | |
| 389 | I | A | 0.0895 | |
| 390 | S | A | -0.1132 | |
| 391 | E | A | -0.3847 | |
| 392 | K | A | -0.8954 | |
| 393 | A | A | -0.8188 | |
| 394 | S | A | -1.1914 | |
| 395 | M | A | 0.0000 | |
| 396 | D | A | -2.6931 | |
| 397 | E | A | -3.3707 | |
| 398 | M | A | 0.0000 | |
| 399 | E | A | -2.5494 | |
| 400 | K | A | -3.1637 | |
| 401 | K | A | -2.8175 | |
| 402 | E | A | 0.0000 | |
| 403 | L | A | -0.2280 | |
| 404 | S | A | -0.7673 | |
| 405 | L | A | -0.7839 | |
| 406 | N | A | -1.2447 | |
| 407 | N | A | -1.1244 | |
| 408 | Y | A | -0.8199 | |
| 409 | I | A | 0.0000 | |
| 410 | E | A | -1.4121 | |
| 411 | K | A | -1.0341 | |
| 412 | T | A | 0.0000 | |
| 413 | D | A | -1.4117 | |
| 414 | Y | A | -1.0619 | |
| 415 | I | A | 0.0000 | |
| 416 | L | A | 0.0000 | |
| 417 | Q | A | -1.3840 | |
| 418 | T | A | 0.0000 | |
| 419 | Y | A | -0.9666 | |
| 420 | N | A | -1.4054 | |
| 421 | I | A | -0.4393 | |
| 422 | F | A | 0.0000 | |
| 423 | K | A | -1.6577 | |
| 424 | S | A | -1.0184 | |
| 425 | K | A | -0.8782 | |
| 426 | S | A | 0.0000 | |
| 427 | N | A | -1.6518 | |
| 428 | I | A | -0.7476 | |
| 429 | I | A | 0.0000 | |
| 430 | N | A | -2.0074 | |
| 431 | N | A | -2.3544 | |
| 432 | N | A | -1.4890 | |
| 433 | S | A | -1.7246 | |
| 434 | K | A | -2.5833 | |
| 435 | N | A | -1.6336 | |
| 436 | I | A | 0.0000 | |
| 437 | S | A | -0.6279 | |
| 438 | S | A | -0.3551 | |
| 439 | K | A | -0.1587 | |
| 440 | Y | A | 0.5576 | |
| 441 | I | A | 1.3574 | |
| 442 | T | A | 0.2620 | |
| 443 | I | A | 0.0000 | |
| 444 | E | A | -1.0315 | |
| 445 | G | A | -1.2908 | |
| 446 | L | A | -1.8251 | |
| 447 | K | A | -2.4580 | |
| 448 | N | A | -3.4825 | |
| 449 | D | A | -3.8247 | |
| 450 | I | A | 0.0000 | |
| 451 | D | A | -2.7485 | |
| 452 | E | A | -3.2727 | |
| 453 | L | A | 0.0000 | |
| 454 | N | A | -1.3476 | |
| 455 | S | A | -0.8196 | |
| 456 | L | A | -0.3303 | |
| 457 | I | A | 0.0000 | |
| 458 | S | A | -0.2579 | |
| 459 | Y | A | 0.4649 | |
| 460 | F | A | -0.4305 | |
| 461 | K | A | -1.3091 | |
| 462 | D | A | -1.8662 | |
| 463 | S | A | -1.0021 | |
| 464 | Q | A | -1.5523 | |
| 465 | E | A | -2.3404 | |
| 466 | T | A | -1.6983 | |
| 467 | L | A | -1.0845 | |
| 468 | I | A | -0.4173 | |
| 469 | K | A | -2.0072 | |
| 470 | D | A | -2.1026 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine