Project name: 13_x11e6_i20e6_i14e7_x4e7

Status: done

Started: 2025-08-11 19:10:15
Settings
Chain sequence(s) A: GPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:53)
Show buried residues

Minimal score value
-4.6422
Maximal score value
3.4565
Average score
-0.3191
Total score value
-83.5936

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7317
2 P A -0.8214
3 G A -0.9419
4 P A -1.3108
5 G A -1.3629
6 A A -1.5916
7 E A -2.9360
8 K A -2.5546
9 L A -0.9253
10 R A -2.7747
11 H A -2.6808
12 L A -1.6111
13 N A -3.0173
14 E A -4.1069
15 K A -3.7812
16 R A -3.8167
17 R A -3.2547
18 F A -0.8781
19 H A -1.5181
20 N A -1.8101
21 G A -1.3098
22 P A -1.2291
23 G A -0.7884
24 P A -0.6563
25 G A -0.6302
26 L A -0.0428
27 D A -2.3394
28 K A -3.4010
29 K A -3.8166
30 Q A -2.9935
31 R A -2.0864
32 F A 0.0244
33 H A -0.6768
34 N A -0.8575
35 I A 0.1752
36 R A -1.6295
37 G A -1.3521
38 R A -1.6740
39 W A -0.1348
40 T A -0.2096
41 G A -0.6815
42 P A -0.7236
43 G A -0.9291
44 P A -1.1325
45 G A -1.3902
46 N A -1.9693
47 P A -1.6563
48 A A -1.7526
49 E A -3.0298
50 K A -2.4038
51 L A -0.8078
52 R A -2.6442
53 H A -2.2845
54 L A -0.9276
55 N A -2.8676
56 E A -4.0791
57 K A -3.8790
58 R A -3.6463
59 R A -2.7750
60 F A 0.0298
61 G A -0.4518
62 P A -0.6509
63 G A -0.7606
64 P A -1.0210
65 G A -1.3637
66 S A -1.2409
67 K A -1.9527
68 I A -0.6023
69 S A -1.4236
70 E A -2.1759
71 Y A -0.4345
72 R A -1.3193
73 H A -0.6863
74 Y A 1.0065
75 C A 1.2403
76 Y A 1.4786
77 S A 1.1254
78 L A 2.0041
79 Y A 1.6949
80 G A 0.3182
81 G A -0.2467
82 P A -0.2739
83 G A -0.4717
84 P A -0.5414
85 G A -0.5348
86 V A 0.5070
87 Y A 0.4648
88 D A -0.7924
89 F A 0.3266
90 A A 0.8035
91 F A 1.3363
92 R A -0.9451
93 D A -0.1222
94 L A 0.8602
95 A A 0.2806
96 A A 0.3110
97 Y A 0.7100
98 R A -0.6023
99 F A 1.0496
100 H A -0.2636
101 N A -0.7415
102 I A 1.2230
103 A A 0.6552
104 G A -0.2606
105 H A 0.2965
106 Y A 1.4213
107 A A 1.2452
108 A A 1.6005
109 Y A 2.3449
110 C A 2.4555
111 Y A 2.5785
112 S A 2.0589
113 L A 2.4805
114 Y A 2.5441
115 G A 1.5178
116 T A 0.9843
117 T A 1.1176
118 L A 1.1682
119 A A 0.7130
120 A A 0.6977
121 Y A 1.0645
122 K A -0.1483
123 T A 0.3123
124 V A 1.4306
125 L A 0.4935
126 E A -0.9618
127 L A 0.1928
128 T A -0.4606
129 E A -1.3185
130 V A 0.0005
131 A A -0.2090
132 A A -0.6257
133 Y A -0.2925
134 Y A -0.2912
135 R A -1.4881
136 A A -0.7813
137 H A -0.9582
138 Y A 0.0472
139 N A 0.1252
140 I A 2.1830
141 V A 2.7534
142 T A 1.9345
143 F A 1.8856
144 A A 1.8527
145 A A 1.7893
146 Y A 1.8473
147 T A 1.5822
148 L A 2.1716
149 Q A 1.0838
150 D A 0.5647
151 I A 2.5216
152 V A 3.2960
153 L A 2.7117
154 H A 2.1395
155 L A 3.2481
156 A A 2.8588
157 A A 2.7186
158 Y A 3.4565
159 L A 3.3956
160 L A 3.1052
161 M A 2.9147
162 G A 2.3542
163 T A 2.5501
164 L A 3.0179
165 G A 2.5343
166 I A 3.4082
167 V A 3.3121
168 A A 2.1795
169 A A 2.3562
170 Y A 2.0566
171 L A 1.1390
172 P A -0.5508
173 A A -1.1797
174 R A -2.7884
175 R A -3.1095
176 A A -2.4313
177 E A -3.1589
178 P A -1.6952
179 Q A -1.2467
180 A A -0.1793
181 A A 0.5881
182 Y A 1.0178
183 L A 1.5296
184 L A 1.5564
185 C A 0.8528
186 H A -0.5732
187 E A -1.8137
188 Q A -1.8106
189 L A -0.6932
190 S A -2.4987
191 D A -3.7174
192 S A -2.9038
193 E A -3.9897
194 E A -4.6422
195 E A -4.5468
196 N A -3.9812
197 D A -3.3491
198 G A -2.0749
199 P A -1.3203
200 G A -1.0785
201 P A -1.0537
202 G A -1.3823
203 Q A -1.8068
204 S A -1.0454
205 T A -0.6580
206 H A -0.3954
207 V A 1.0987
208 D A -0.1571
209 I A 0.5145
210 R A -1.6261
211 T A -0.5947
212 L A 0.2638
213 E A -1.3364
214 D A -1.2749
215 L A 0.9397
216 L A 1.6265
217 M A 0.9019
218 G A -0.0470
219 P A -0.5024
220 G A -0.8076
221 P A -0.8655
222 G A -0.8377
223 T A -0.4020
224 P A -0.3288
225 T A 0.1053
226 L A 1.3321
227 H A -0.2367
228 E A -0.4853
229 Y A 1.1983
230 M A 1.3828
231 L A 0.7556
232 D A -0.8338
233 L A 0.5774
234 Q A -0.9521
235 P A -1.5335
236 E A -2.4673
237 T A -1.5938
238 G A -1.3839
239 P A -1.0870
240 G A -0.7756
241 P A -0.7567
242 G A -0.5331
243 L A 0.9554
244 Q A -0.1626
245 D A -0.3204
246 I A 2.4027
247 V A 2.7549
248 L A 1.9340
249 H A 0.6427
250 L A 1.0290
251 E A -1.4606
252 P A -2.0431
253 Q A -2.4577
254 N A -2.5275
255 E A -1.9666
256 I A 0.3377
257 P A -0.2893
258 G A -0.5662
259 P A -0.6550
260 G A -0.9796
261 P A -0.8214
262 G A -0.7380
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Laboratory of Theory of Biopolymers 2018