Chain sequence(s) |
A: GPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:52) [INFO] Main: Simulation completed successfully. (00:02:53) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -0.7317 | |
2 | P | A | -0.8214 | |
3 | G | A | -0.9419 | |
4 | P | A | -1.3108 | |
5 | G | A | -1.3629 | |
6 | A | A | -1.5916 | |
7 | E | A | -2.9360 | |
8 | K | A | -2.5546 | |
9 | L | A | -0.9253 | |
10 | R | A | -2.7747 | |
11 | H | A | -2.6808 | |
12 | L | A | -1.6111 | |
13 | N | A | -3.0173 | |
14 | E | A | -4.1069 | |
15 | K | A | -3.7812 | |
16 | R | A | -3.8167 | |
17 | R | A | -3.2547 | |
18 | F | A | -0.8781 | |
19 | H | A | -1.5181 | |
20 | N | A | -1.8101 | |
21 | G | A | -1.3098 | |
22 | P | A | -1.2291 | |
23 | G | A | -0.7884 | |
24 | P | A | -0.6563 | |
25 | G | A | -0.6302 | |
26 | L | A | -0.0428 | |
27 | D | A | -2.3394 | |
28 | K | A | -3.4010 | |
29 | K | A | -3.8166 | |
30 | Q | A | -2.9935 | |
31 | R | A | -2.0864 | |
32 | F | A | 0.0244 | |
33 | H | A | -0.6768 | |
34 | N | A | -0.8575 | |
35 | I | A | 0.1752 | |
36 | R | A | -1.6295 | |
37 | G | A | -1.3521 | |
38 | R | A | -1.6740 | |
39 | W | A | -0.1348 | |
40 | T | A | -0.2096 | |
41 | G | A | -0.6815 | |
42 | P | A | -0.7236 | |
43 | G | A | -0.9291 | |
44 | P | A | -1.1325 | |
45 | G | A | -1.3902 | |
46 | N | A | -1.9693 | |
47 | P | A | -1.6563 | |
48 | A | A | -1.7526 | |
49 | E | A | -3.0298 | |
50 | K | A | -2.4038 | |
51 | L | A | -0.8078 | |
52 | R | A | -2.6442 | |
53 | H | A | -2.2845 | |
54 | L | A | -0.9276 | |
55 | N | A | -2.8676 | |
56 | E | A | -4.0791 | |
57 | K | A | -3.8790 | |
58 | R | A | -3.6463 | |
59 | R | A | -2.7750 | |
60 | F | A | 0.0298 | |
61 | G | A | -0.4518 | |
62 | P | A | -0.6509 | |
63 | G | A | -0.7606 | |
64 | P | A | -1.0210 | |
65 | G | A | -1.3637 | |
66 | S | A | -1.2409 | |
67 | K | A | -1.9527 | |
68 | I | A | -0.6023 | |
69 | S | A | -1.4236 | |
70 | E | A | -2.1759 | |
71 | Y | A | -0.4345 | |
72 | R | A | -1.3193 | |
73 | H | A | -0.6863 | |
74 | Y | A | 1.0065 | |
75 | C | A | 1.2403 | |
76 | Y | A | 1.4786 | |
77 | S | A | 1.1254 | |
78 | L | A | 2.0041 | |
79 | Y | A | 1.6949 | |
80 | G | A | 0.3182 | |
81 | G | A | -0.2467 | |
82 | P | A | -0.2739 | |
83 | G | A | -0.4717 | |
84 | P | A | -0.5414 | |
85 | G | A | -0.5348 | |
86 | V | A | 0.5070 | |
87 | Y | A | 0.4648 | |
88 | D | A | -0.7924 | |
89 | F | A | 0.3266 | |
90 | A | A | 0.8035 | |
91 | F | A | 1.3363 | |
92 | R | A | -0.9451 | |
93 | D | A | -0.1222 | |
94 | L | A | 0.8602 | |
95 | A | A | 0.2806 | |
96 | A | A | 0.3110 | |
97 | Y | A | 0.7100 | |
98 | R | A | -0.6023 | |
99 | F | A | 1.0496 | |
100 | H | A | -0.2636 | |
101 | N | A | -0.7415 | |
102 | I | A | 1.2230 | |
103 | A | A | 0.6552 | |
104 | G | A | -0.2606 | |
105 | H | A | 0.2965 | |
106 | Y | A | 1.4213 | |
107 | A | A | 1.2452 | |
108 | A | A | 1.6005 | |
109 | Y | A | 2.3449 | |
110 | C | A | 2.4555 | |
111 | Y | A | 2.5785 | |
112 | S | A | 2.0589 | |
113 | L | A | 2.4805 | |
114 | Y | A | 2.5441 | |
115 | G | A | 1.5178 | |
116 | T | A | 0.9843 | |
117 | T | A | 1.1176 | |
118 | L | A | 1.1682 | |
119 | A | A | 0.7130 | |
120 | A | A | 0.6977 | |
121 | Y | A | 1.0645 | |
122 | K | A | -0.1483 | |
123 | T | A | 0.3123 | |
124 | V | A | 1.4306 | |
125 | L | A | 0.4935 | |
126 | E | A | -0.9618 | |
127 | L | A | 0.1928 | |
128 | T | A | -0.4606 | |
129 | E | A | -1.3185 | |
130 | V | A | 0.0005 | |
131 | A | A | -0.2090 | |
132 | A | A | -0.6257 | |
133 | Y | A | -0.2925 | |
134 | Y | A | -0.2912 | |
135 | R | A | -1.4881 | |
136 | A | A | -0.7813 | |
137 | H | A | -0.9582 | |
138 | Y | A | 0.0472 | |
139 | N | A | 0.1252 | |
140 | I | A | 2.1830 | |
141 | V | A | 2.7534 | |
142 | T | A | 1.9345 | |
143 | F | A | 1.8856 | |
144 | A | A | 1.8527 | |
145 | A | A | 1.7893 | |
146 | Y | A | 1.8473 | |
147 | T | A | 1.5822 | |
148 | L | A | 2.1716 | |
149 | Q | A | 1.0838 | |
150 | D | A | 0.5647 | |
151 | I | A | 2.5216 | |
152 | V | A | 3.2960 | |
153 | L | A | 2.7117 | |
154 | H | A | 2.1395 | |
155 | L | A | 3.2481 | |
156 | A | A | 2.8588 | |
157 | A | A | 2.7186 | |
158 | Y | A | 3.4565 | |
159 | L | A | 3.3956 | |
160 | L | A | 3.1052 | |
161 | M | A | 2.9147 | |
162 | G | A | 2.3542 | |
163 | T | A | 2.5501 | |
164 | L | A | 3.0179 | |
165 | G | A | 2.5343 | |
166 | I | A | 3.4082 | |
167 | V | A | 3.3121 | |
168 | A | A | 2.1795 | |
169 | A | A | 2.3562 | |
170 | Y | A | 2.0566 | |
171 | L | A | 1.1390 | |
172 | P | A | -0.5508 | |
173 | A | A | -1.1797 | |
174 | R | A | -2.7884 | |
175 | R | A | -3.1095 | |
176 | A | A | -2.4313 | |
177 | E | A | -3.1589 | |
178 | P | A | -1.6952 | |
179 | Q | A | -1.2467 | |
180 | A | A | -0.1793 | |
181 | A | A | 0.5881 | |
182 | Y | A | 1.0178 | |
183 | L | A | 1.5296 | |
184 | L | A | 1.5564 | |
185 | C | A | 0.8528 | |
186 | H | A | -0.5732 | |
187 | E | A | -1.8137 | |
188 | Q | A | -1.8106 | |
189 | L | A | -0.6932 | |
190 | S | A | -2.4987 | |
191 | D | A | -3.7174 | |
192 | S | A | -2.9038 | |
193 | E | A | -3.9897 | |
194 | E | A | -4.6422 | |
195 | E | A | -4.5468 | |
196 | N | A | -3.9812 | |
197 | D | A | -3.3491 | |
198 | G | A | -2.0749 | |
199 | P | A | -1.3203 | |
200 | G | A | -1.0785 | |
201 | P | A | -1.0537 | |
202 | G | A | -1.3823 | |
203 | Q | A | -1.8068 | |
204 | S | A | -1.0454 | |
205 | T | A | -0.6580 | |
206 | H | A | -0.3954 | |
207 | V | A | 1.0987 | |
208 | D | A | -0.1571 | |
209 | I | A | 0.5145 | |
210 | R | A | -1.6261 | |
211 | T | A | -0.5947 | |
212 | L | A | 0.2638 | |
213 | E | A | -1.3364 | |
214 | D | A | -1.2749 | |
215 | L | A | 0.9397 | |
216 | L | A | 1.6265 | |
217 | M | A | 0.9019 | |
218 | G | A | -0.0470 | |
219 | P | A | -0.5024 | |
220 | G | A | -0.8076 | |
221 | P | A | -0.8655 | |
222 | G | A | -0.8377 | |
223 | T | A | -0.4020 | |
224 | P | A | -0.3288 | |
225 | T | A | 0.1053 | |
226 | L | A | 1.3321 | |
227 | H | A | -0.2367 | |
228 | E | A | -0.4853 | |
229 | Y | A | 1.1983 | |
230 | M | A | 1.3828 | |
231 | L | A | 0.7556 | |
232 | D | A | -0.8338 | |
233 | L | A | 0.5774 | |
234 | Q | A | -0.9521 | |
235 | P | A | -1.5335 | |
236 | E | A | -2.4673 | |
237 | T | A | -1.5938 | |
238 | G | A | -1.3839 | |
239 | P | A | -1.0870 | |
240 | G | A | -0.7756 | |
241 | P | A | -0.7567 | |
242 | G | A | -0.5331 | |
243 | L | A | 0.9554 | |
244 | Q | A | -0.1626 | |
245 | D | A | -0.3204 | |
246 | I | A | 2.4027 | |
247 | V | A | 2.7549 | |
248 | L | A | 1.9340 | |
249 | H | A | 0.6427 | |
250 | L | A | 1.0290 | |
251 | E | A | -1.4606 | |
252 | P | A | -2.0431 | |
253 | Q | A | -2.4577 | |
254 | N | A | -2.5275 | |
255 | E | A | -1.9666 | |
256 | I | A | 0.3377 | |
257 | P | A | -0.2893 | |
258 | G | A | -0.5662 | |
259 | P | A | -0.6550 | |
260 | G | A | -0.9796 | |
261 | P | A | -0.8214 | |
262 | G | A | -0.7380 |