| Chain sequence(s) |
A: APLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 24 | A | A | 0.1988 | |
| 25 | P | A | 0.2717 | |
| 26 | L | A | 1.0149 | |
| 27 | A | A | 0.1531 | |
| 28 | A | A | -0.4362 | |
| 29 | D | A | -1.4848 | |
| 30 | T | A | -0.7290 | |
| 31 | P | A | -0.7010 | |
| 32 | T | A | -0.5318 | |
| 33 | A | A | -0.1166 | |
| 34 | C | A | 0.0568 | |
| 35 | C | A | 0.0000 | |
| 36 | F | A | 1.7482 | |
| 37 | S | A | 0.8002 | |
| 38 | Y | A | 0.3025 | |
| 39 | T | A | -0.7069 | |
| 40 | S | A | -1.2965 | |
| 41 | R | A | -2.4586 | |
| 42 | Q | A | -2.5008 | |
| 43 | I | A | -1.0060 | |
| 44 | P | A | -0.8878 | |
| 45 | Q | A | -1.2777 | |
| 46 | N | A | -1.1280 | |
| 47 | F | A | -0.3232 | |
| 48 | I | A | 0.0000 | |
| 49 | A | A | -1.2542 | |
| 50 | D | A | -0.7301 | |
| 51 | Y | A | -0.0403 | |
| 52 | F | A | 0.3126 | |
| 53 | E | A | -1.1409 | |
| 54 | T | A | -0.9114 | |
| 55 | S | A | -1.0150 | |
| 56 | S | A | -1.2673 | |
| 57 | Q | A | -1.4753 | |
| 58 | C | A | -0.7236 | |
| 59 | S | A | -0.6667 | |
| 60 | K | A | -0.9443 | |
| 61 | P | A | -1.0934 | |
| 62 | S | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | I | A | -0.1277 | |
| 65 | F | A | 0.0000 | |
| 66 | L | A | -1.1136 | |
| 67 | T | A | 0.0000 | |
| 68 | K | A | -2.9234 | |
| 69 | R | A | -3.2375 | |
| 70 | G | A | -2.8403 | |
| 71 | R | A | -3.1419 | |
| 72 | Q | A | -2.1468 | |
| 73 | V | A | -0.3938 | |
| 74 | C | A | 0.4427 | |
| 75 | A | A | 0.0000 | |
| 76 | D | A | -1.1013 | |
| 77 | P | A | -1.6238 | |
| 78 | S | A | -1.4254 | |
| 79 | E | A | -2.5229 | |
| 80 | E | A | -3.2805 | |
| 81 | W | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | Q | A | -2.8813 | |
| 84 | K | A | -3.1702 | |
| 85 | Y | A | 0.0000 | |
| 86 | V | A | -1.1749 | |
| 87 | S | A | -1.2097 | |
| 88 | D | A | -1.0156 | |
| 89 | L | A | -0.8856 | |
| 90 | E | A | -1.3207 | |
| 91 | L | A | 0.5611 | |
| 92 | S | A | -0.0120 | |
| 93 | A | A | -0.2501 |