| Chain sequence(s) |
L: KNVLADGFGKPYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 419 | K | L | -1.9312 | |
| 420 | N | L | -1.2626 | |
| 421 | V | L | 1.8271 | |
| 422 | L | L | 1.8779 | |
| 423 | A | L | -0.0079 | |
| 424 | D | L | -1.8441 | |
| 425 | G | L | -0.3447 | |
| 426 | F | L | 1.8290 | |
| 427 | G | L | -0.4317 | |
| 428 | K | L | -1.8483 | |
| 429 | P | L | -0.5556 | |
| 430 | Y | L | 0.9443 | |
| 431 | D | L | -1.5514 |