Project name: obj1 [mutate: LA11C, LG45C, YH59C]

Status: done

Started: 2025-02-10 12:36:02
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Chain sequence(s) C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB
Selected Chain(s) C
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues LG45C,LA11C,YH59C
Energy difference between WT (input) and mutated protein (by FoldX) 4.01855 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with C chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:24)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:33)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:55)
Show buried residues

Minimal score value
-3.3265
Maximal score value
1.5458
Average score
-0.7903
Total score value
-94.8378

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E C -2.0068
2 V C -0.9006
3 Q C -1.2218
4 L C 0.0000
5 V C 0.5884
6 E C 0.2442
7 S C -0.4160
8 G C -0.8280
9 G C -0.3366
10 G C 0.1447
11 A C -0.0811 mutated: LA11C
12 V C -0.7648
13 Q C -1.6733
14 P C -1.6527
15 G C -1.4104
16 G C -1.1313
17 S C -1.2285
18 L C -1.1425
19 R C -2.1482
20 L C 0.0000
21 S C -0.5426
22 C C 0.0000
23 A C -0.2017
24 A C 0.0000
25 S C -0.2017
26 D C 0.0000
27 F C 1.5458
28 T C 0.2525
29 F C 0.0000
30 R C -2.0328
31 S C -0.8867
32 Y C -1.2169
33 E C -1.1435
34 M C 0.0000
35 S C 0.0000
36 W C 0.0000
37 V C 0.0000
38 R C 0.0000
39 Q C -1.1763
40 A C -1.4292
41 P C -1.3393
42 G C -1.6453
43 K C -2.5865
44 G C -2.0018
45 G C -1.5312 mutated: LG45C
46 E C -1.3294
47 W C -0.0989
48 V C 0.0000
49 S C 0.0000
50 A C 0.0000
51 I C 0.0000
52 S C -0.7647
53 G C -1.2495
54 S C -1.2336
55 G C -1.0904
56 G C -0.7479
57 S C -0.6349
58 T C -0.4884
59 H C -0.7909 mutated: YH59C
60 Y C -1.0281
61 A C -1.4307
62 D C -2.4959
63 S C -1.7150
64 V C 0.0000
65 K C -2.5770
66 G C -1.6175
67 R C 0.0000
68 F C 0.0000
69 T C -0.8298
70 I C 0.0000
71 S C -0.5652
72 R C -1.3626
73 D C -1.9805
74 N C -2.1901
75 S C -1.7905
76 K C -2.3163
77 N C -1.6491
78 T C 0.0000
79 L C 0.0000
80 Y C -0.6697
81 L C 0.0000
82 Q C -1.2344
83 M C 0.0000
84 N C -1.3335
85 S C -1.2327
86 L C 0.0000
87 R C -2.4824
88 A C -1.9099
89 E C -2.3549
90 D C 0.0000
91 T C -0.6619
92 A C 0.0000
93 I C 0.7285
94 Y C 0.0000
95 Y C 0.4509
96 C C 0.0000
97 A C 0.0000
98 R C 0.0000
99 L C 0.0000
100 R C -3.1814
101 D C -3.3265
102 G C -2.0748
103 F C -1.3801
104 N C -2.4159
105 K C -3.1751
106 G C -1.8932
107 F C -0.9377
108 D C -1.0666
109 Y C -0.1439
110 W C 0.6988
111 G C 0.0075
112 Q C -0.8467
113 G C 0.1089
114 T C 0.5602
115 L C 1.4867
116 V C 0.0000
117 T C -0.2746
118 V C 0.0000
119 S C -1.1131
120 S C -1.0909
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Laboratory of Theory of Biopolymers 2018