| Chain sequence(s) |
A: GPAATGAAPALRSTSEYVTPTDLLYYAETDLITFTGHPTADIVVNGKVLVPKVSAYQYRVFLLKLPDPNTLPLPSEDFLDKSTEIRIWQLRAFRIGVGGPLGKGTVGHSKFNKLGDVTNPTKYQKESKDDTVNYSYTPKLRQEYIIGDKPPTGVYTAPAAPAPGLPPGAEPPLEKVTTLVEHGDMADIGFGARDFAALEPRKNDVPDDIRDTTTKVFDYEGMRAEPYGRRMFDSDRYEKSSDSKTYVLSGKIKNPLPSKTPPSKLYKKPPKTSPYSKLPSYRYFTTPDAGEITAADELFNKPIFLTRTKGLNQGVLWNNRLYVTVVDNRRAAVETITTQTSTPAPNVYNPADYVTSKRYTEELKLELIVQLCIIPLTPETLEYLERLDPSILVNSNLPFIPKVERKDPLEGHKFIDIDLTDKLSTNLEKSELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5637 | |
| 2 | P | A | -0.4478 | |
| 3 | A | A | -0.2601 | |
| 4 | A | A | -0.2388 | |
| 5 | T | A | -0.2652 | |
| 6 | G | A | -0.4671 | |
| 7 | A | A | -0.2051 | |
| 8 | A | A | -0.0434 | |
| 9 | P | A | -0.1184 | |
| 10 | A | A | 0.2398 | |
| 11 | L | A | 0.6456 | |
| 12 | R | A | -0.4926 | |
| 13 | S | A | -0.5778 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.3996 | |
| 16 | E | A | -2.0308 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.4688 | |
| 20 | P | A | -0.6139 | |
| 21 | T | A | -0.7710 | |
| 22 | D | A | -1.6546 | |
| 23 | L | A | -0.5534 | |
| 24 | L | A | -0.2323 | |
| 25 | Y | A | 0.0000 | |
| 26 | Y | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.4319 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2595 | |
| 31 | L | A | 0.3059 | |
| 32 | I | A | 0.0958 | |
| 33 | T | A | -0.0852 | |
| 34 | F | A | -0.0928 | |
| 35 | T | A | -0.2477 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.9158 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.6823 | |
| 40 | A | A | -0.2876 | |
| 41 | D | A | 0.0340 | |
| 42 | I | A | 1.8567 | |
| 43 | V | A | 2.5492 | |
| 44 | V | A | 1.6238 | |
| 45 | N | A | -0.5630 | |
| 46 | G | A | -0.3610 | |
| 47 | K | A | -0.1259 | |
| 48 | V | A | 2.1678 | |
| 49 | L | A | 2.5217 | |
| 50 | V | A | 1.4038 | |
| 51 | P | A | 0.3115 | |
| 52 | K | A | -0.4201 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0876 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.7607 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.7548 | |
| 70 | T | A | -0.3167 | |
| 71 | L | A | -0.1647 | |
| 72 | P | A | -0.4606 | |
| 73 | L | A | -0.7368 | |
| 74 | P | A | -0.8538 | |
| 75 | S | A | -1.5335 | |
| 76 | E | A | -2.8906 | |
| 77 | D | A | -2.5293 | |
| 78 | F | A | -1.1348 | |
| 79 | L | A | -1.7155 | |
| 80 | D | A | -2.6240 | |
| 81 | K | A | -2.7021 | |
| 82 | S | A | -1.4265 | |
| 83 | T | A | -1.2625 | |
| 84 | E | A | -1.2922 | |
| 85 | I | A | 0.0000 | |
| 86 | R | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.3671 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | R | A | -0.9861 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -0.9034 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.6732 | |
| 99 | G | A | -0.7522 | |
| 100 | P | A | -0.4436 | |
| 101 | L | A | -0.0004 | |
| 102 | G | A | -0.5492 | |
| 103 | K | A | -1.5437 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4250 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.8449 | |
| 108 | H | A | 0.0000 | |
| 109 | S | A | -1.5893 | |
| 110 | K | A | -2.5793 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | K | A | -0.9280 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -0.9399 | |
| 117 | V | A | -0.3056 | |
| 118 | T | A | -0.8688 | |
| 119 | N | A | -1.7825 | |
| 120 | P | A | -1.3587 | |
| 121 | T | A | -1.3471 | |
| 122 | K | A | -2.1446 | |
| 123 | Y | A | -1.0526 | |
| 124 | Q | A | -1.8129 | |
| 125 | K | A | -3.0372 | |
| 126 | E | A | -3.4256 | |
| 127 | S | A | -2.9768 | |
| 128 | K | A | -3.1006 | |
| 129 | D | A | -3.2754 | |
| 130 | D | A | -2.4030 | |
| 131 | T | A | -1.6554 | |
| 132 | V | A | -1.0459 | |
| 133 | N | A | -1.6434 | |
| 134 | Y | A | -0.8352 | |
| 135 | S | A | -0.4749 | |
| 136 | Y | A | 0.0000 | |
| 137 | T | A | -0.7873 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | R | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | K | A | -0.4859 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.0448 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -0.0222 | |
| 155 | Y | A | -0.6471 | |
| 156 | T | A | -0.9748 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.5880 | |
| 159 | A | A | -0.3343 | |
| 160 | A | A | -0.1388 | |
| 161 | P | A | -0.3262 | |
| 162 | A | A | -0.1307 | |
| 163 | P | A | -0.3209 | |
| 164 | G | A | -0.3101 | |
| 165 | L | A | -0.0368 | |
| 166 | P | A | -0.4651 | |
| 167 | P | A | -0.7003 | |
| 168 | G | A | -1.2618 | |
| 169 | A | A | -1.4111 | |
| 170 | E | A | -2.1820 | |
| 171 | P | A | -0.8791 | |
| 172 | P | A | -0.4324 | |
| 173 | L | A | -0.2341 | |
| 174 | E | A | -1.4414 | |
| 175 | K | A | -1.9087 | |
| 176 | V | A | -0.7720 | |
| 177 | T | A | -0.2790 | |
| 178 | T | A | -0.0476 | |
| 179 | L | A | -0.2458 | |
| 180 | V | A | 0.0000 | |
| 181 | E | A | -1.0864 | |
| 182 | H | A | -0.9758 | |
| 183 | G | A | -0.7337 | |
| 184 | D | A | -0.6939 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.2906 | |
| 190 | F | A | 0.0237 | |
| 191 | G | A | -0.2387 | |
| 192 | A | A | -0.3994 | |
| 193 | R | A | -0.9373 | |
| 194 | D | A | -0.9437 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -1.5025 | |
| 197 | A | A | -0.6973 | |
| 198 | L | A | -0.8202 | |
| 199 | E | A | -1.5013 | |
| 200 | P | A | -1.5968 | |
| 201 | R | A | -2.0195 | |
| 202 | K | A | -3.0411 | |
| 203 | N | A | -2.0062 | |
| 204 | D | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6109 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.3428 | |
| 211 | D | A | -2.5260 | |
| 212 | T | A | -1.3577 | |
| 213 | T | A | -0.8390 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.3467 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | -0.8335 | |
| 219 | Y | A | -1.4502 | |
| 220 | E | A | -2.6171 | |
| 221 | G | A | -1.7828 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -3.0274 | |
| 224 | A | A | -1.6655 | |
| 225 | E | A | -1.3760 | |
| 226 | P | A | -0.4631 | |
| 227 | Y | A | -0.3036 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.7454 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -1.1010 | |
| 234 | S | A | -1.2633 | |
| 235 | D | A | -1.8707 | |
| 236 | R | A | -2.3061 | |
| 237 | Y | A | -1.4682 | |
| 238 | E | A | -1.4896 | |
| 239 | K | A | -1.4927 | |
| 240 | S | A | -1.6098 | |
| 241 | S | A | -1.8049 | |
| 242 | D | A | -2.3879 | |
| 243 | S | A | -1.7113 | |
| 244 | K | A | -1.8599 | |
| 245 | T | A | -0.7467 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | L | A | 0.0000 | |
| 249 | S | A | -1.5178 | |
| 250 | G | A | -1.4797 | |
| 251 | K | A | -2.2038 | |
| 252 | I | A | -1.4281 | |
| 253 | K | A | -2.7100 | |
| 254 | N | A | -2.0980 | |
| 255 | P | A | -0.5451 | |
| 256 | L | A | 0.6972 | |
| 257 | P | A | -0.4653 | |
| 258 | S | A | -1.1263 | |
| 259 | K | A | -1.9278 | |
| 260 | T | A | -1.2319 | |
| 261 | P | A | -0.9993 | |
| 262 | P | A | -1.1969 | |
| 263 | S | A | -1.6542 | |
| 264 | K | A | -2.0565 | |
| 265 | L | A | -0.2997 | |
| 266 | Y | A | -0.9926 | |
| 267 | K | A | -2.5698 | |
| 268 | K | A | -2.8649 | |
| 269 | P | A | -1.7732 | |
| 270 | P | A | -1.6477 | |
| 271 | K | A | -2.2737 | |
| 272 | T | A | -0.9065 | |
| 273 | S | A | -0.8531 | |
| 274 | P | A | -0.4916 | |
| 275 | Y | A | 0.0313 | |
| 276 | S | A | -1.0850 | |
| 277 | K | A | -1.4497 | |
| 278 | L | A | 0.4397 | |
| 279 | P | A | -0.3365 | |
| 280 | S | A | -0.5142 | |
| 281 | Y | A | 0.9651 | |
| 282 | R | A | 0.2877 | |
| 283 | Y | A | 1.3446 | |
| 284 | F | A | 0.6382 | |
| 285 | T | A | -0.4750 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.6457 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -1.7062 | |
| 291 | E | A | -2.0986 | |
| 292 | I | A | -1.0989 | |
| 293 | T | A | -0.5285 | |
| 294 | A | A | -0.1541 | |
| 295 | A | A | -0.4329 | |
| 296 | D | A | -0.9513 | |
| 297 | E | A | -0.8774 | |
| 298 | L | A | -1.0824 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.8281 | |
| 301 | K | A | -2.0825 | |
| 302 | P | A | -0.9973 | |
| 303 | I | A | -0.1737 | |
| 304 | F | A | -0.0547 | |
| 305 | L | A | 0.0000 | |
| 306 | T | A | -0.8909 | |
| 307 | R | A | -2.3022 | |
| 308 | T | A | 0.0000 | |
| 309 | K | A | -2.4947 | |
| 310 | G | A | -1.5145 | |
| 311 | L | A | -0.4694 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | -1.0796 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | N | A | -0.9472 | |
| 319 | N | A | -0.9418 | |
| 320 | R | A | -1.0705 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | R | A | 0.0000 | |
| 330 | R | A | -0.5209 | |
| 331 | A | A | 0.0000 | |
| 332 | A | A | -0.7226 | |
| 333 | V | A | -0.8084 | |
| 334 | E | A | -1.6442 | |
| 335 | T | A | -0.7679 | |
| 336 | I | A | 0.7215 | |
| 337 | T | A | 0.4507 | |
| 338 | T | A | 0.2054 | |
| 339 | Q | A | -0.9032 | |
| 340 | T | A | -0.3743 | |
| 341 | S | A | -0.6597 | |
| 342 | T | A | -0.5447 | |
| 343 | P | A | -0.7020 | |
| 344 | A | A | -0.4004 | |
| 345 | P | A | -0.3302 | |
| 346 | N | A | -0.3152 | |
| 347 | V | A | 1.4767 | |
| 348 | Y | A | 1.3748 | |
| 349 | N | A | -0.0674 | |
| 350 | P | A | 0.0050 | |
| 351 | A | A | -0.0170 | |
| 352 | D | A | -0.0508 | |
| 353 | Y | A | 0.6186 | |
| 354 | V | A | 1.5852 | |
| 355 | T | A | 0.6715 | |
| 356 | S | A | -0.3290 | |
| 357 | K | A | -1.7428 | |
| 358 | R | A | -1.3237 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.5952 | |
| 361 | E | A | -0.5968 | |
| 362 | E | A | -0.5787 | |
| 363 | L | A | 0.0000 | |
| 364 | K | A | -0.8980 | |
| 365 | L | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3974 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | I | A | 0.1385 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6828 | |
| 376 | L | A | -0.8927 | |
| 377 | T | A | -0.9683 | |
| 378 | P | A | -1.5340 | |
| 379 | E | A | -2.4593 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.6802 | |
| 382 | E | A | -2.9389 | |
| 383 | Y | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -2.1717 | |
| 386 | R | A | -1.7820 | |
| 387 | L | A | -0.8780 | |
| 388 | D | A | -0.8294 | |
| 389 | P | A | -1.3184 | |
| 390 | S | A | -1.2760 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.3521 | |
| 394 | N | A | -1.9274 | |
| 395 | S | A | -1.3065 | |
| 396 | N | A | -1.7531 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | -0.0789 | |
| 399 | F | A | 1.3577 | |
| 400 | I | A | 0.3944 | |
| 401 | P | A | -0.4624 | |
| 402 | K | A | -1.8525 | |
| 403 | V | A | -1.0021 | |
| 404 | E | A | -2.7581 | |
| 405 | R | A | -3.4165 | |
| 406 | K | A | -3.4680 | |
| 407 | D | A | -2.8498 | |
| 408 | P | A | -1.8840 | |
| 409 | L | A | -1.7795 | |
| 410 | E | A | -2.9663 | |
| 411 | G | A | -1.9815 | |
| 412 | H | A | -1.9792 | |
| 413 | K | A | -2.4887 | |
| 414 | F | A | -1.2085 | |
| 415 | I | A | -1.0501 | |
| 416 | D | A | -2.2402 | |
| 417 | I | A | -1.8231 | |
| 418 | D | A | -2.9497 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0831 | |
| 421 | D | A | -2.9352 | |
| 422 | K | A | -2.9213 | |
| 423 | L | A | -1.3185 | |
| 424 | S | A | -1.1005 | |
| 425 | T | A | -0.6379 | |
| 426 | N | A | -1.7318 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.3033 | |
| 429 | K | A | -3.3637 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.4575 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.6155 | |
| 435 | L | A | -0.9589 | |
| 436 | Y | A | -0.6473 | |
| 437 | L | A | -0.5885 | |
| 438 | N | A | -1.6418 | |
| 439 | R | A | -1.9724 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine