| Chain sequence(s) |
C: DARRKAEMLQNEAKTLLAQANSKLQLLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYSTCL
B: ENVERWQGQYEGLRGQDLGQAVLDAGHSVSTLEKTLPQLLAKLSILENRGVHNASLALSASIGRVRELCAQARGAASKVKV D: DTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKCIRNLEDIRKTLPSGCFNTPSIEKP input PDB |
| Selected Chain(s) | B,C,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LQ26C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.0099 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] FoldX: Building mutant model (00:11:27)
[INFO] FoldX: Starting FoldX energy minimalization (00:11:58)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:16:32)
[INFO] Main: Simulation completed successfully. (00:16:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | B | -2.8729 | |
| 2 | N | B | -2.3170 | |
| 3 | V | B | -0.8212 | |
| 4 | E | B | -2.9648 | |
| 5 | R | B | -3.2726 | |
| 6 | W | B | -1.2804 | |
| 7 | Q | B | -1.8860 | |
| 8 | G | B | -2.5047 | |
| 9 | Q | B | -2.1088 | |
| 10 | Y | B | -1.7109 | |
| 11 | E | B | -2.8929 | |
| 12 | G | B | -2.0577 | |
| 13 | L | B | -1.2163 | |
| 14 | R | B | -3.0335 | |
| 15 | G | B | -3.0109 | |
| 16 | Q | B | -2.5812 | |
| 17 | D | B | -2.6812 | |
| 18 | L | B | -2.5858 | |
| 19 | G | B | -1.6609 | |
| 20 | Q | B | -1.6030 | |
| 21 | A | B | 0.0000 | |
| 22 | V | B | 0.0000 | |
| 23 | L | B | 0.0304 | |
| 24 | D | B | -1.0110 | |
| 25 | A | B | 0.0000 | |
| 26 | G | B | -1.0374 | |
| 27 | H | B | -1.2957 | |
| 28 | S | B | -1.3868 | |
| 29 | V | B | 0.0000 | |
| 30 | S | B | -1.5301 | |
| 31 | T | B | -1.7228 | |
| 32 | L | B | 0.0000 | |
| 33 | E | B | -3.1274 | |
| 34 | K | B | -2.8514 | |
| 35 | T | B | -1.8416 | |
| 36 | L | B | 0.0000 | |
| 37 | P | B | -1.5353 | |
| 38 | Q | B | -1.5146 | |
| 39 | L | B | 0.0000 | |
| 40 | L | B | -0.0713 | |
| 41 | A | B | -0.0191 | |
| 42 | K | B | -0.3620 | |
| 43 | L | B | 0.0000 | |
| 44 | S | B | -0.3568 | |
| 45 | I | B | 0.5643 | |
| 46 | L | B | 0.0000 | |
| 47 | E | B | -2.0510 | |
| 48 | N | B | -1.5489 | |
| 49 | R | B | -0.9174 | |
| 50 | G | B | -0.4905 | |
| 51 | V | B | 0.8530 | |
| 52 | H | B | 0.0521 | |
| 53 | N | B | -0.5678 | |
| 54 | A | B | 0.0000 | |
| 55 | S | B | 0.4152 | |
| 56 | L | B | 1.2982 | |
| 57 | A | B | 0.3333 | |
| 58 | L | B | 0.0000 | |
| 59 | S | B | -0.0553 | |
| 60 | A | B | -0.0432 | |
| 61 | S | B | -0.7065 | |
| 62 | I | B | 0.0000 | |
| 63 | G | B | -1.9029 | |
| 64 | R | B | -2.3917 | |
| 65 | V | B | 0.0000 | |
| 66 | R | B | -2.8681 | |
| 67 | E | B | -3.2203 | |
| 68 | L | B | 0.0000 | |
| 69 | C | B | 0.0000 | |
| 70 | A | B | -1.8877 | |
| 71 | Q | B | -2.0113 | |
| 72 | A | B | 0.0000 | |
| 73 | R | B | -2.2229 | |
| 74 | G | B | -1.5610 | |
| 75 | A | B | -1.6858 | |
| 76 | A | B | 0.0000 | |
| 77 | S | B | -1.6149 | |
| 78 | K | B | -2.2246 | |
| 79 | V | B | 0.0000 | |
| 80 | K | B | -1.2967 | |
| 81 | V | B | 0.6460 | |
| 1 | D | C | -2.6359 | |
| 2 | A | C | -2.3816 | |
| 3 | R | C | -3.2294 | |
| 4 | R | C | -3.2569 | |
| 5 | K | C | -2.4624 | |
| 6 | A | C | 0.0000 | |
| 7 | E | C | -2.6987 | |
| 8 | M | C | -1.6482 | |
| 9 | L | C | 0.0000 | |
| 10 | Q | C | -2.1167 | |
| 11 | N | C | -2.2996 | |
| 12 | E | C | -2.1535 | |
| 13 | A | C | 0.0000 | |
| 14 | K | C | -2.2592 | |
| 15 | T | C | -1.5321 | |
| 16 | L | C | -1.1376 | |
| 17 | L | C | -1.4849 | |
| 18 | A | C | -1.0587 | |
| 19 | Q | C | -1.3846 | |
| 20 | A | C | 0.0000 | |
| 21 | N | C | -1.6211 | |
| 22 | S | C | -1.5037 | |
| 23 | K | C | -1.8081 | |
| 24 | L | C | -1.6595 | |
| 25 | Q | C | -2.3115 | |
| 26 | Q | C | -1.9069 | mutated: LQ26C |
| 27 | L | C | 0.0000 | |
| 28 | K | C | -2.4677 | |
| 29 | D | C | -2.6699 | |
| 30 | L | C | 0.0000 | |
| 31 | E | C | -2.6427 | |
| 32 | R | C | -3.7525 | |
| 33 | K | C | -3.4642 | |
| 34 | Y | C | -2.8528 | |
| 35 | E | C | -3.4965 | |
| 36 | D | C | -3.6476 | |
| 37 | N | C | 0.0000 | |
| 38 | Q | C | -2.4659 | |
| 39 | R | C | -3.0879 | |
| 40 | Y | C | -1.9212 | |
| 41 | L | C | 0.0000 | |
| 42 | E | C | -2.6845 | |
| 43 | D | C | -3.0381 | |
| 44 | K | C | -2.3261 | |
| 45 | A | C | -1.8969 | |
| 46 | Q | C | -2.7962 | |
| 47 | E | C | -2.6183 | |
| 48 | L | C | 0.0000 | |
| 49 | A | C | -1.9915 | |
| 50 | R | C | -2.8002 | |
| 51 | L | C | 0.0000 | |
| 52 | E | C | 0.0000 | |
| 53 | G | C | -2.0726 | |
| 54 | E | C | -2.3829 | |
| 55 | V | C | 0.0000 | |
| 56 | R | C | -2.4279 | |
| 57 | S | C | -2.0357 | |
| 58 | L | C | 0.0000 | |
| 59 | L | C | -2.3820 | |
| 60 | K | C | -3.0040 | |
| 61 | D | C | -2.7042 | |
| 62 | I | C | 0.0000 | |
| 63 | S | C | -2.0922 | |
| 64 | Q | C | -2.0016 | |
| 65 | K | C | -1.5170 | |
| 66 | V | C | 0.0000 | |
| 67 | A | C | -0.4022 | |
| 68 | V | C | 0.8991 | |
| 69 | Y | C | 0.6682 | |
| 70 | S | C | 0.3097 | |
| 71 | T | C | 0.8509 | |
| 72 | C | C | 1.4475 | |
| 73 | L | C | 1.7673 | |
| 1 | D | D | -1.5164 | |
| 2 | T | D | -0.4667 | |
| 3 | V | D | 0.4911 | |
| 4 | D | D | -0.9960 | |
| 5 | L | D | -1.3447 | |
| 6 | N | D | -2.1776 | |
| 7 | K | D | -2.0714 | |
| 8 | L | D | 0.0000 | |
| 9 | N | D | -2.9604 | |
| 10 | E | D | -3.2831 | |
| 11 | I | D | 0.0000 | |
| 12 | E | D | -2.3890 | |
| 13 | G | D | -2.0856 | |
| 14 | T | D | -2.2059 | |
| 15 | L | D | 0.0000 | |
| 16 | N | D | -2.6631 | |
| 17 | K | D | -3.5524 | |
| 18 | A | D | 0.0000 | |
| 19 | K | D | -2.8195 | |
| 20 | D | D | -3.4359 | |
| 21 | E | D | -2.8808 | |
| 22 | M | D | -2.4507 | |
| 23 | K | D | -2.9368 | |
| 24 | V | D | -0.5532 | |
| 25 | S | D | -1.6498 | |
| 26 | D | D | -3.0962 | |
| 27 | L | D | 0.0000 | |
| 28 | D | D | -3.9707 | |
| 29 | R | D | -4.1828 | |
| 30 | K | D | -3.7413 | |
| 31 | V | D | 0.0000 | |
| 32 | S | D | -3.1311 | |
| 33 | D | D | -4.2034 | |
| 34 | L | D | 0.0000 | |
| 35 | E | D | -3.7561 | |
| 36 | N | D | -3.8847 | |
| 37 | E | D | -3.8754 | |
| 38 | A | D | 0.0000 | |
| 39 | K | D | -4.0825 | |
| 40 | K | D | -3.6602 | |
| 41 | Q | D | -2.7767 | |
| 42 | E | D | -2.4646 | |
| 43 | A | D | -1.8291 | |
| 44 | A | D | -1.6411 | |
| 45 | I | D | 0.0000 | |
| 46 | M | D | -1.2314 | |
| 47 | D | D | -2.6208 | |
| 48 | Y | D | -2.0378 | |
| 49 | N | D | -2.4139 | |
| 50 | R | D | -3.6705 | |
| 51 | D | D | -3.3038 | |
| 52 | I | D | 0.0000 | |
| 53 | E | D | -3.8907 | |
| 54 | E | D | -3.7395 | |
| 55 | I | D | 0.0000 | |
| 56 | M | D | -2.2933 | |
| 57 | K | D | -3.1871 | |
| 58 | C | D | -2.4989 | |
| 59 | I | D | 0.0000 | |
| 60 | R | D | -2.8837 | |
| 61 | N | D | -2.7209 | |
| 62 | L | D | 0.0000 | |
| 63 | E | D | -2.8485 | |
| 64 | D | D | -3.2138 | |
| 65 | I | D | -2.0293 | |
| 66 | R | D | -2.6175 | |
| 67 | K | D | -2.7083 | |
| 68 | T | D | -1.2449 | |
| 69 | L | D | 0.0000 | |
| 70 | P | D | 0.0509 | |
| 71 | S | D | -0.2014 | |
| 72 | G | D | 0.3130 | |
| 73 | C | D | 1.4347 | |
| 74 | F | D | 1.7618 | |
| 75 | N | D | 0.1275 | |
| 76 | T | D | 0.3351 | |
| 77 | P | D | 0.1095 | |
| 78 | S | D | -0.3981 | |
| 79 | I | D | 0.3595 | |
| 80 | E | D | -1.8240 | |
| 81 | K | D | -2.1228 | |
| 82 | P | D | -1.3013 |