| Chain sequence(s) |
A: VFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNRQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 220 | V | A | 2.6960 | |
| 221 | F | A | 2.7799 | |
| 222 | I | A | 1.2315 | |
| 223 | P | A | -0.1555 | |
| 224 | K | A | -1.5212 | |
| 225 | P | A | -1.2280 | |
| 226 | F | A | -0.8196 | |
| 227 | R | A | -1.6881 | |
| 228 | A | A | -0.3767 | |
| 229 | F | A | 0.1773 | |
| 230 | A | A | 0.0000 | |
| 231 | F | A | 1.0949 | |
| 232 | V | A | 0.0000 | |
| 233 | T | A | 1.5479 | |
| 234 | F | A | 0.9323 | |
| 235 | A | A | -0.3861 | |
| 236 | D | A | -1.6142 | |
| 237 | D | A | -2.7228 | |
| 238 | Q | A | -2.1265 | |
| 239 | I | A | -0.5954 | |
| 240 | A | A | 0.0000 | |
| 241 | Q | A | -2.2209 | |
| 242 | S | A | -1.3774 | |
| 243 | L | A | -0.8612 | |
| 244 | C | A | -1.3141 | |
| 245 | G | A | -1.7341 | |
| 246 | E | A | -2.8427 | |
| 247 | D | A | -2.3162 | |
| 248 | L | A | 0.2373 | |
| 249 | I | A | 1.8502 | |
| 250 | I | A | 1.0547 | |
| 251 | K | A | -0.6961 | |
| 252 | G | A | 0.1553 | |
| 253 | I | A | 1.6086 | |
| 254 | S | A | 0.9271 | |
| 255 | V | A | 0.2280 | |
| 256 | H | A | -0.7434 | |
| 257 | I | A | -0.1386 | |
| 258 | S | A | -0.7739 | |
| 259 | N | A | -1.2828 | |
| 260 | A | A | -1.4855 | |
| 261 | E | A | -2.3777 | |
| 262 | P | A | -2.3058 | |
| 263 | K | A | -3.3506 | |
| 264 | H | A | -3.5310 | |
| 265 | N | A | -3.3718 | |
| 266 | S | A | -2.9958 | |
| 267 | N | A | -3.7146 | |
| 268 | R | A | -3.8760 | |
| 269 | Q | A | -2.6232 |