Project name: query_structure

Status: done

Started: 2026-03-16 23:38:38
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Chain sequence(s) A: GSVSSVPTKLEVVAATPTSLLISWDAFGHQYEPVYYYRITYGETGGNSPVQEFTVPGYYSTATISGLKPGVDYTITVYAWYVDGSYSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-2.7729
Maximal score value
2.0651
Average score
-0.2551
Total score value
-24.4902

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2083
2 S A 0.3407
3 V A 1.3051
4 S A 0.4639
5 S A 0.4321
6 V A 0.6777
7 P A -0.2092
8 T A -0.5011
9 K A -1.9875
10 L A 0.0000
11 E A -1.2362
12 V A 0.4054
13 V A 1.7085
14 A A 0.9783
15 A A 0.3223
16 T A -0.3346
17 P A -1.0694
18 T A -0.9688
19 S A -0.5206
20 L A 0.0000
21 L A 0.8671
22 I A 0.0000
23 S A -0.3186
24 W A 0.0000
25 D A -1.5649
26 A A -0.1769
27 F A -0.3003
28 G A -0.8989
29 H A -1.6516
30 Q A -1.5377
31 Y A -0.4271
32 E A -1.2585
33 P A -0.4216
34 V A 0.0000
35 Y A 1.8390
36 Y A 1.7399
37 Y A 0.0000
38 R A -0.3197
39 I A 0.0000
40 T A 0.0000
41 Y A -0.3159
42 G A 0.0000
43 E A -1.8104
44 T A -1.6907
45 G A -1.3369
46 G A -1.3455
47 N A -1.5439
48 S A -0.8256
49 P A -0.3135
50 V A 0.4509
51 Q A -0.8352
52 E A -1.6706
53 F A -0.6920
54 T A -0.2347
55 V A 0.8249
56 P A 1.1129
57 G A 1.5961
58 Y A 2.0651
59 Y A 1.7947
60 S A 0.6596
61 T A 0.4900
62 A A 0.0000
63 T A 0.2643
64 I A 0.0000
65 S A -0.6585
66 G A -1.0290
67 L A 0.0000
68 K A -2.4241
69 P A -1.6532
70 G A -1.4194
71 V A -1.6749
72 D A -2.6839
73 Y A 0.0000
74 T A -0.8945
75 I A 0.0000
76 T A -0.3620
77 V A 0.0000
78 Y A 0.3595
79 A A 0.0000
80 W A 1.0814
81 Y A 0.9064
82 V A 1.2019
83 D A -0.9826
84 G A -0.2245
85 S A 0.1990
86 Y A 1.3580
87 S A 0.8801
88 S A 0.3136
89 P A 0.1670
90 I A 0.0874
91 S A -0.4844
92 I A -0.5974
93 N A -1.8078
94 Y A -1.5953
95 R A -2.7729
96 T A -1.5922
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Laboratory of Theory of Biopolymers 2018