| Chain sequence(s) |
A: AVILWRRRRRRR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | A | A | 1.3383 | |
| 3 | V | A | 3.0957 | |
| 4 | I | A | 3.8866 | |
| 5 | L | A | 3.0799 | |
| 6 | W | A | 1.1079 | |
| 7 | R | A | -2.2101 | |
| 8 | R | A | -3.7564 | |
| 9 | R | A | -4.3624 | |
| 10 | R | A | -4.3600 | |
| 11 | R | A | -4.3545 | |
| 12 | R | A | -3.9836 | |
| 13 | R | A | -3.0944 |