Chain sequence(s) |
A: SYDLVMSKDYIYVTTIEYMYFYNGCEIHFFLTM
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30) [INFO] Main: Simulation completed successfully. (00:00:31) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | S | A | 0.5364 | |
2 | Y | A | 1.3210 | |
3 | D | A | -0.2904 | |
4 | L | A | 0.7572 | |
5 | V | A | 1.4238 | |
6 | M | A | 0.9433 | |
7 | S | A | 0.5269 | |
8 | K | A | -0.2381 | |
9 | D | A | 0.1445 | |
10 | Y | A | 2.0212 | |
11 | I | A | 2.4018 | |
12 | Y | A | 2.1805 | |
13 | V | A | 2.0032 | |
14 | T | A | 1.5271 | |
15 | T | A | 1.8673 | |
16 | I | A | 1.8438 | |
17 | E | A | 0.7920 | |
18 | Y | A | 2.1396 | |
19 | M | A | 2.0284 | |
20 | Y | A | 2.1513 | |
21 | F | A | 2.9980 | |
22 | Y | A | 2.2015 | |
23 | N | A | 0.6434 | |
24 | G | A | 1.3588 | |
25 | C | A | 1.6557 | |
26 | E | A | 0.9006 | |
27 | I | A | 2.4139 | |
28 | H | A | 1.6162 | |
29 | F | A | 2.9532 | |
30 | F | A | 3.4325 | |
31 | L | A | 3.1178 | |
32 | T | A | 2.2586 | |
33 | M | A | 2.2696 |