Project name: 5ba543c4ceee86e

Status: done

Started: 2025-06-23 11:56:25
Settings
Chain sequence(s) A: SYDLVMSKDYIYVTTIEYMYFYNGCEIHFFLTM
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-0.2904
Maximal score value
3.4325
Average score
1.6334
Total score value
53.9006

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 0.5364
2 Y A 1.3210
3 D A -0.2904
4 L A 0.7572
5 V A 1.4238
6 M A 0.9433
7 S A 0.5269
8 K A -0.2381
9 D A 0.1445
10 Y A 2.0212
11 I A 2.4018
12 Y A 2.1805
13 V A 2.0032
14 T A 1.5271
15 T A 1.8673
16 I A 1.8438
17 E A 0.7920
18 Y A 2.1396
19 M A 2.0284
20 Y A 2.1513
21 F A 2.9980
22 Y A 2.2015
23 N A 0.6434
24 G A 1.3588
25 C A 1.6557
26 E A 0.9006
27 I A 2.4139
28 H A 1.6162
29 F A 2.9532
30 F A 3.4325
31 L A 3.1178
32 T A 2.2586
33 M A 2.2696
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Laboratory of Theory of Biopolymers 2018