Project name: P01 [mutate: WF3A] [mutate: FW3A, IQ2A, IQ4A, IQ6A, IQ8A, IQ13A]

Status: done

Started: 2025-10-06 13:41:33
Settings
Chain sequence(s) A: KIFIKIWIKLLKIW
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues IQ13A,FW3A,IQ2A,IQ4A,IQ6A,IQ8A
Energy difference between WT (input) and mutated protein (by FoldX) 0.559754 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:09)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:11)
Show buried residues

Minimal score value
-3.6341
Maximal score value
0.226
Average score
-2.1327
Total score value
-29.858

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.8337
2 Q A -2.5517 mutated: IQ2A
3 W A -1.5551 mutated: FW3A
4 Q A -2.9513 mutated: IQ4A
5 K A -3.6341
6 Q A -2.7722 mutated: IQ6A
7 W A -1.9014
8 Q A -2.6808 mutated: IQ8A
9 K A -3.0775
10 L A -1.4862
11 L A -0.8192
12 K A -2.2443
13 Q A -1.5765 mutated: IQ13A
14 W A 0.2260
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Laboratory of Theory of Biopolymers 2018