| Chain sequence(s) |
P: KWCFRVCYRGICYRRCR
input PDB |
| Selected Chain(s) | P |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with P chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | P | -1.5326 | |
| 2 | W | P | -0.0330 | |
| 3 | C | P | -0.7442 | |
| 4 | F | P | -0.8429 | |
| 5 | R | P | -1.8678 | |
| 6 | V | P | 0.2003 | |
| 7 | C | P | 1.4233 | |
| 8 | Y | P | 1.6348 | |
| 9 | R | P | -0.5541 | |
| 10 | G | P | 0.3356 | |
| 11 | I | P | 2.3976 | |
| 12 | C | P | 1.4316 | |
| 13 | Y | P | 0.3216 | |
| 14 | R | P | -2.1869 | |
| 15 | R | P | -1.9864 | |
| 16 | C | P | -1.4538 | |
| 17 | R | P | -1.8942 |