| Chain sequence(s) |
B: SKRWSVEEIIEMIRRYGLWWWSRARTPHERNQVYLWVYDFAHWAAHRLKLSNEEWEELWKAMWEIMESLP
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:15)
[INFO] Main: Simulation completed successfully. (00:01:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.3538 | |
| 2 | K | B | -2.5451 | |
| 3 | R | B | -2.9009 | |
| 4 | W | B | -1.4146 | |
| 5 | S | B | -1.5086 | |
| 6 | V | B | 0.0000 | |
| 7 | E | B | -2.8049 | |
| 8 | E | B | -2.4675 | |
| 9 | I | B | 0.0000 | |
| 10 | I | B | -2.3432 | |
| 11 | E | B | -2.9803 | |
| 12 | M | B | -1.9484 | |
| 13 | I | B | 0.0000 | |
| 14 | R | B | -2.6201 | |
| 15 | R | B | -2.0156 | |
| 16 | Y | B | -0.0395 | |
| 17 | G | B | 0.0000 | |
| 18 | L | B | 0.2640 | |
| 19 | W | B | 0.8130 | |
| 20 | W | B | 0.1590 | |
| 21 | W | B | -0.4373 | |
| 22 | S | B | -0.7321 | |
| 23 | R | B | -2.1821 | |
| 24 | A | B | -2.7219 | |
| 25 | R | B | -2.9885 | |
| 26 | T | B | -2.4605 | |
| 27 | P | B | -2.2598 | |
| 28 | H | B | -2.7877 | |
| 29 | E | B | -3.1337 | |
| 30 | R | B | -2.9777 | |
| 31 | N | B | -2.2530 | |
| 32 | Q | B | -1.4502 | |
| 33 | V | B | 0.0000 | |
| 34 | Y | B | 0.0987 | |
| 35 | L | B | 0.6063 | |
| 36 | W | B | 0.3778 | |
| 37 | V | B | 0.0000 | |
| 38 | Y | B | 0.6442 | |
| 39 | D | B | -0.5111 | |
| 40 | F | B | 0.0371 | |
| 41 | A | B | 0.0000 | |
| 42 | H | B | -0.7971 | |
| 43 | W | B | -0.9224 | |
| 44 | A | B | 0.0000 | |
| 45 | A | B | -1.6694 | |
| 46 | H | B | -2.2475 | |
| 47 | R | B | -2.8700 | |
| 48 | L | B | -2.3517 | |
| 49 | K | B | -2.7477 | |
| 50 | L | B | -2.0559 | |
| 51 | S | B | -1.9762 | |
| 52 | N | B | -2.9141 | |
| 53 | E | B | -3.2810 | |
| 54 | E | B | -2.7561 | |
| 55 | W | B | -2.4607 | |
| 56 | E | B | -3.2403 | |
| 57 | E | B | -3.6843 | |
| 58 | L | B | 0.0000 | |
| 59 | W | B | -1.6078 | |
| 60 | K | B | -2.4937 | |
| 61 | A | B | -2.3572 | |
| 62 | M | B | 0.0000 | |
| 63 | W | B | -0.6242 | |
| 64 | E | B | -2.5373 | |
| 65 | I | B | 0.0000 | |
| 66 | M | B | 0.0000 | |
| 67 | E | B | -2.2572 | |
| 68 | S | B | -1.6426 | |
| 69 | L | B | 0.0000 | |
| 70 | P | B | -0.4853 |