| Chain sequence(s) |
A: MSHHHHHHSGMKLSEWEIVLERRDLETTGKVVKRFEEMPDKFPPEERERFERQKKEYEKRKEEFEKLTSNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:07)
[INFO] Main: Simulation completed successfully. (00:04:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5391 | |
| 2 | S | A | -0.6353 | |
| 3 | H | A | -1.7533 | |
| 4 | H | A | -2.3644 | |
| 5 | H | A | -2.8037 | |
| 6 | H | A | -2.8050 | |
| 7 | H | A | -2.6117 | |
| 8 | H | A | -2.0672 | |
| 9 | S | A | -1.4432 | |
| 10 | G | A | -0.9324 | |
| 11 | M | A | -0.0889 | |
| 12 | K | A | -1.5988 | |
| 13 | L | A | -0.5643 | |
| 14 | S | A | -0.7292 | |
| 15 | E | A | -1.2288 | |
| 16 | W | A | 0.4113 | |
| 17 | E | A | -0.6313 | |
| 18 | I | A | -0.5868 | |
| 19 | V | A | -0.1490 | |
| 20 | L | A | -0.5121 | |
| 21 | E | A | -1.9632 | |
| 22 | R | A | -3.3929 | |
| 23 | R | A | -3.4985 | |
| 24 | D | A | -3.1157 | |
| 25 | L | A | 0.0000 | |
| 26 | E | A | -3.7171 | |
| 27 | T | A | -2.5869 | |
| 28 | T | A | -2.4851 | |
| 29 | G | A | -2.6354 | |
| 30 | K | A | -2.9073 | |
| 31 | V | A | -1.3556 | |
| 32 | V | A | 0.0000 | |
| 33 | K | A | -3.5055 | |
| 34 | R | A | -3.4220 | |
| 35 | F | A | 0.0000 | |
| 36 | E | A | -3.9458 | |
| 37 | E | A | -3.6191 | |
| 38 | M | A | -2.6008 | |
| 39 | P | A | -2.8631 | |
| 40 | D | A | -3.0607 | |
| 41 | K | A | -2.7871 | |
| 42 | F | A | -2.1448 | |
| 43 | P | A | -2.1502 | |
| 44 | P | A | -2.6807 | |
| 45 | E | A | -3.4255 | |
| 46 | E | A | -3.6784 | |
| 47 | R | A | -4.2145 | |
| 48 | E | A | -4.4629 | |
| 49 | R | A | -4.7501 | |
| 50 | F | A | -3.8204 | |
| 51 | E | A | -4.6170 | |
| 52 | R | A | -5.1493 | |
| 53 | Q | A | -4.1091 | |
| 54 | K | A | -4.4175 | |
| 55 | K | A | -5.2645 | |
| 56 | E | A | -5.1568 | |
| 57 | Y | A | 0.0000 | |
| 58 | E | A | -5.2761 | |
| 59 | K | A | -5.4898 | |
| 60 | R | A | -4.9587 | |
| 61 | K | A | -5.3694 | |
| 62 | E | A | -5.3597 | |
| 63 | E | A | -4.5689 | |
| 64 | F | A | 0.0000 | |
| 65 | E | A | -4.4936 | |
| 66 | K | A | -3.8431 | |
| 67 | L | A | -2.1056 | |
| 68 | T | A | -2.1086 | |
| 69 | S | A | -1.9491 | |
| 70 | N | A | -2.1474 | |
| 71 | S | A | -1.3621 |