| Chain sequence(s) |
A: RNGIPCGESCVYLPCFTAPLGCSCSSKVCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.4308 | |
| 2 | N | A | -1.9443 | |
| 3 | G | A | -0.7490 | |
| 4 | I | A | 1.0340 | |
| 5 | P | A | 0.2816 | |
| 6 | C | A | 0.8225 | |
| 7 | G | A | 0.1190 | |
| 8 | E | A | 0.2260 | |
| 9 | S | A | 0.5791 | |
| 10 | C | A | 1.0193 | |
| 11 | V | A | 1.2651 | |
| 12 | Y | A | 1.7760 | |
| 13 | L | A | 1.6482 | |
| 14 | P | A | 1.1022 | |
| 15 | C | A | 0.0000 | |
| 16 | F | A | 2.0749 | |
| 17 | T | A | 1.3222 | |
| 18 | A | A | 0.9432 | |
| 19 | P | A | 0.7739 | |
| 20 | L | A | 1.5423 | |
| 21 | G | A | 0.4086 | |
| 22 | C | A | 0.7881 | |
| 23 | S | A | 0.2034 | |
| 24 | C | A | 0.4389 | |
| 25 | S | A | -0.5211 | |
| 26 | S | A | -0.8082 | |
| 27 | K | A | -0.6937 | |
| 28 | V | A | 0.1933 | |
| 29 | C | A | 0.0000 | |
| 30 | G | A | -0.3122 |