| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCAASGFTIRSYAMSWVRQAPGKGLEWVSGVSGSSSITYYADSVKGRFTVSRDTSKNTFYLQMSSLRTEDTAVYYCAAFLGSGTYRWDHWGQGTLVAVSP
L: QSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVQWYQQLPRTAPKLLIYANTDRPSGVPDRFSGSKSGTSVSLAITGLLAEDEADYYCQSFDSTLNAWIFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.8236 | |
| 2 | V | H | -0.7316 | |
| 3 | Q | H | -0.9619 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.3735 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1979 | |
| 8 | G | H | -0.7147 | |
| 9 | G | H | 0.1013 | |
| 11 | G | H | 0.6285 | |
| 12 | L | H | 1.3957 | |
| 13 | V | H | 0.0508 | |
| 14 | Q | H | -1.3141 | |
| 15 | P | H | -1.5145 | |
| 16 | G | H | -1.3129 | |
| 17 | G | H | -0.8314 | |
| 18 | S | H | -0.9771 | |
| 19 | L | H | -0.5494 | |
| 20 | R | H | -1.5132 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | 0.0000 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2444 | |
| 25 | A | H | -0.2897 | |
| 26 | S | H | -0.5844 | |
| 27 | G | H | -0.9909 | |
| 28 | F | H | -0.5736 | |
| 29 | T | H | -0.8838 | |
| 30 | I | H | 0.0000 | |
| 35 | R | H | -2.1061 | |
| 36 | S | H | -1.0451 | |
| 37 | Y | H | -0.5164 | |
| 38 | A | H | -0.0320 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6546 | |
| 45 | A | H | -1.0409 | |
| 46 | P | H | -0.8375 | |
| 47 | G | H | -1.6809 | |
| 48 | K | H | -2.2545 | |
| 49 | G | H | -1.6566 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0571 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | V | H | 0.0000 | |
| 57 | S | H | 0.1576 | |
| 58 | G | H | -0.6458 | |
| 59 | S | H | -0.5275 | |
| 62 | S | H | -0.1599 | |
| 63 | S | H | 0.4404 | |
| 64 | I | H | 1.6051 | |
| 65 | T | H | 0.9631 | |
| 66 | Y | H | 0.4184 | |
| 67 | Y | H | -0.7643 | |
| 68 | A | H | -1.2517 | |
| 69 | D | H | -2.2646 | |
| 70 | S | H | -1.7160 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5274 | |
| 74 | G | H | -1.6749 | |
| 75 | R | H | -1.4250 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7888 | |
| 78 | V | H | 0.0000 | |
| 79 | S | H | -0.4439 | |
| 80 | R | H | -1.0124 | |
| 81 | D | H | -1.3994 | |
| 82 | T | H | -1.4900 | |
| 83 | S | H | -1.4620 | |
| 84 | K | H | -2.0813 | |
| 85 | N | H | -1.6274 | |
| 86 | T | H | -0.9848 | |
| 87 | F | H | 0.0000 | |
| 88 | Y | H | -0.5177 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.2791 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.9685 | |
| 93 | S | H | -1.0208 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2084 | |
| 96 | T | H | -1.7696 | |
| 97 | E | H | -2.2585 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4094 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.6499 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | F | H | 0.0000 | |
| 108 | L | H | 0.1220 | |
| 109 | G | H | -0.2670 | |
| 110 | S | H | -0.3597 | |
| 111 | G | H | -0.4054 | |
| 112 | T | H | 0.0231 | |
| 113 | Y | H | 0.6943 | |
| 114 | R | H | -0.0102 | |
| 115 | W | H | 0.0000 | |
| 116 | D | H | -0.5073 | |
| 117 | H | H | -0.6430 | |
| 118 | W | H | -0.4598 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1529 | |
| 121 | G | H | -0.1421 | |
| 122 | T | H | 0.3084 | |
| 123 | L | H | 1.1521 | |
| 124 | V | H | 0.0000 | |
| 125 | A | H | 0.3326 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6836 | |
| 128 | P | H | -0.7294 | |
| 1 | Q | L | -1.1485 | |
| 2 | S | L | -0.3187 | |
| 3 | V | L | 0.5286 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.2983 | |
| 6 | Q | L | -0.4130 | |
| 7 | P | L | -0.4755 | |
| 8 | P | L | -0.7139 | |
| 9 | S | L | -0.6354 | |
| 11 | V | L | -0.2130 | |
| 12 | S | L | -0.0034 | |
| 13 | G | L | -0.1494 | |
| 14 | A | L | 0.0209 | |
| 15 | P | L | -0.4358 | |
| 16 | G | L | -1.3936 | |
| 17 | Q | L | -2.1303 | |
| 18 | R | L | -2.6367 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.4937 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.2285 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -0.3737 | |
| 25 | G | L | -0.3908 | |
| 26 | N | L | -0.8835 | |
| 27 | S | L | -0.8402 | |
| 28 | S | L | -0.3249 | |
| 29 | N | L | 0.0000 | |
| 30 | I | L | 0.0000 | |
| 31 | G | L | -1.1001 | |
| 35 | A | L | -0.6420 | |
| 36 | G | L | -0.7438 | |
| 37 | Y | L | -0.2397 | |
| 38 | D | L | -0.7682 | |
| 39 | V | L | 0.0000 | |
| 40 | Q | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | L | L | -0.8983 | |
| 46 | P | L | -1.1727 | |
| 47 | R | L | -2.0349 | |
| 48 | T | L | -1.2263 | |
| 49 | A | L | -0.9177 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.9474 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.4817 | |
| 56 | A | L | -0.5672 | |
| 57 | N | L | -0.9026 | |
| 65 | T | L | -0.9684 | |
| 66 | D | L | -1.2762 | |
| 67 | R | L | -1.7580 | |
| 68 | P | L | -0.9777 | |
| 69 | S | L | -0.7442 | |
| 70 | G | L | -0.8795 | |
| 71 | V | L | -1.0881 | |
| 72 | P | L | -1.2984 | |
| 74 | D | L | -2.1541 | |
| 75 | R | L | -1.2834 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.9492 | |
| 78 | G | L | -0.6544 | |
| 79 | S | L | -0.6749 | |
| 80 | K | L | -1.1105 | |
| 83 | S | L | -0.8261 | |
| 84 | G | L | -1.0332 | |
| 85 | T | L | -0.9585 | |
| 86 | S | L | -0.7182 | |
| 87 | V | L | 0.0000 | |
| 88 | S | L | -0.3997 | |
| 89 | L | L | 0.0000 | |
| 90 | A | L | -0.5328 | |
| 91 | I | L | 0.0000 | |
| 92 | T | L | -1.5846 | |
| 93 | G | L | -1.3639 | |
| 94 | L | L | 0.0000 | |
| 95 | L | L | -0.0812 | |
| 96 | A | L | -0.4340 | |
| 97 | E | L | -1.6453 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.1141 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.0447 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | S | L | 0.0000 | |
| 107 | F | L | 0.2304 | |
| 108 | D | L | 0.0000 | |
| 109 | S | L | -0.1990 | |
| 110 | T | L | 0.0563 | |
| 113 | L | L | 0.3183 | |
| 114 | N | L | -0.5649 | |
| 115 | A | L | -0.1932 | |
| 116 | W | L | 0.0000 | |
| 117 | I | L | 0.1691 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0043 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1583 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.0295 | |
| 126 | V | L | 0.4213 | |
| 127 | L | L | 1.4822 |