Project name: A?42_8

Status: done

Started: 2026-06-19 12:23:39
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Chain sequence(s) A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
C: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
E: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
D: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
G: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
F: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
H: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:17)
Show buried residues

Minimal score value
-3.11
Maximal score value
2.6099
Average score
-0.669
Total score value
-219.4193

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.0427
2 A A -1.3103
3 E A -2.0955
4 F A -0.8345
5 R A -2.4694
6 H A -2.6651
7 D A -2.7531
8 S A -1.9115
9 G A -0.8410
10 Y A -0.1172
11 E A -1.2556
12 V A -0.6342
13 H A -1.9694
14 H A -2.3167
15 Q A -2.5087
16 K A -2.3205
17 L A -0.5697
18 V A -0.2551
19 F A 0.4026
20 F A -0.7183
21 A A -1.5971
22 E A -2.7543
23 D A -2.9894
24 V A 0.0000
25 G A -1.9891
26 S A -1.6650
27 N A -2.2008
28 K A -1.8081
29 G A -0.8692
30 A A -0.3840
31 I A -0.4000
32 I A 0.0000
33 G A 0.0000
34 L A 0.0000
35 M A 0.0000
36 V A 0.4543
37 G A 0.0000
38 G A 0.3709
39 V A 0.6245
40 V A 0.0000
41 I A 0.0000
42 A A -0.0059
1 D B -2.0525
2 A B -1.4851
3 E B -1.9552
4 F B -0.2651
5 R B -1.8858
6 H B -2.0252
7 D B -1.7187
8 S B -1.3306
9 G B 0.0000
10 Y B 0.5975
11 E B -0.0487
12 V B -0.0672
13 H B -1.3138
14 H B -1.8203
15 Q B -2.1273
16 K B -1.4694
17 L B 0.0000
18 V B 0.4234
19 F B 0.0000
20 F B 0.2511
21 A B 0.0000
22 E B -2.0122
23 D B -2.5728
24 V B -1.5085
25 G B -1.5640
26 S B -1.2546
27 N B -1.2009
28 K B -1.1472
29 G B -0.0620
30 A B 0.0000
31 I B 0.0000
32 I B 0.0000
33 G B 0.0000
34 L B 0.0000
35 M B 0.4929
36 V B 0.0000
37 G B 0.0000
38 G B 0.0000
39 V B 0.3659
40 V B 0.0000
41 I B 0.0000
42 A B -0.0204
1 D C -2.0392
2 A C -1.3005
3 E C -1.9934
4 F C -0.5983
5 R C -2.1902
6 H C -1.7471
7 D C -1.9819
8 S C -1.3115
9 G C 0.0000
10 Y C 0.2025
11 E C -0.0966
12 V C 0.0806
13 H C -1.1422
14 H C -1.8355
15 Q C -1.4549
16 K C -0.6986
17 L C 0.0000
18 V C 0.9415
19 F C 1.0942
20 F C 1.0375
21 A C -0.4790
22 E C -2.0489
23 D C -1.9309
24 V C -0.8631
25 G C -1.1601
26 S C -0.8366
27 N C -0.9540
28 K C -0.7122
29 G C 0.0000
30 A C 0.0000
31 I C 0.0000
32 I C 0.0000
33 G C 0.0000
34 L C 0.0000
35 M C 0.8744
36 V C 0.0000
37 G C 0.0000
38 G C 0.0000
39 V C 1.1025
40 V C 0.0000
41 I C 0.0000
42 A C -0.0923
1 D D -2.2256
2 A D -1.5421
3 E D -1.9451
4 F D -0.6555
5 R D -2.3769
6 H D -2.9690
7 D D -2.5890
8 S D -1.7067
9 G D -0.1573
10 Y D 1.1674
11 E D 0.2595
12 V D 0.5589
13 H D -1.0749
14 H D -1.9683
15 Q D -1.7770
16 K D -1.3439
17 L D 0.1927
18 V D 0.0000
19 F D 0.8975
20 F D 0.0096
21 A D -1.2865
22 E D -2.7484
23 D D -2.8965
24 V D -1.5401
25 G D -1.5426
26 S D -1.1997
27 N D -1.3772
28 K D -1.3205
29 G D -0.6401
30 A D 0.0000
31 I D -0.1108
32 I D 0.1060
33 G D 0.0000
34 L D 0.0000
35 M D 0.0000
36 V D 0.0000
37 G D 0.0000
38 G D 0.0000
39 V D 0.0000
40 V D 1.0875
41 I D 1.2380
42 A D 0.8811
1 D E -2.0549
2 A E -1.4187
3 E E -2.0386
4 F E -0.6612
5 R E -2.7980
6 H E -2.9164
7 D E -2.8903
8 S E -1.9351
9 G E -0.2593
10 Y E 1.1707
11 E E -0.0307
12 V E -0.2388
13 H E -1.7468
14 H E -2.0814
15 Q E -2.1300
16 K E -2.2972
17 L E -0.0536
18 V E 0.5641
19 F E 1.6379
20 F E 1.4275
21 A E -0.5329
22 E E -2.4500
23 D E -3.1100
24 V E -1.3436
25 G E -1.5408
26 S E -1.0273
27 N E -1.2923
28 K E 0.0000
29 G E -0.7436
30 A E -0.2911
31 I E 0.0000
32 I E 0.0000
33 G E 0.1355
34 L E 0.0000
35 M E 0.6297
36 V E 0.0000
37 G E 0.0000
38 G E 0.8210
39 V E 1.2156
40 V E 1.1692
41 I E 0.0000
42 A E 0.3744
1 D F -2.0251
2 A F -1.3977
3 E F -1.9953
4 F F -0.4567
5 R F -2.1655
6 H F -2.3013
7 D F -2.1296
8 S F -1.3396
9 G F 0.0206
10 Y F 1.3413
11 E F 0.5176
12 V F 1.0126
13 H F -0.6977
14 H F -1.6592
15 Q F -1.4466
16 K F -0.9260
17 L F 0.4318
18 V F 0.0000
19 F F 0.8981
20 F F 0.0840
21 A F -1.2448
22 E F -2.7634
23 D F -2.9183
24 V F -1.8497
25 G F -1.7841
26 S F -1.4103
27 N F -1.8132
28 K F -2.0033
29 G F -1.3646
30 A F 0.0000
31 I F 0.0000
32 I F -0.2027
33 G F -0.2176
34 L F 0.0000
35 M F 0.3949
36 V F 0.0000
37 G F 0.0000
38 G F 0.0000
39 V F 0.0000
40 V F 1.5197
41 I F 1.5279
42 A F 0.9522
1 D G -2.0485
2 A G -1.2968
3 E G -2.1063
4 F G -0.9566
5 R G -2.8970
6 H G -2.8941
7 D G -2.8590
8 S G -1.9657
9 G G -0.5775
10 Y G 1.2811
11 E G -0.3152
12 V G -0.0448
13 H G -1.5877
14 H G -2.0266
15 Q G -2.2212
16 K G -2.1717
17 L G 0.0057
18 V G 0.6163
19 F G 1.6541
20 F G 1.1632
21 A G -0.7281
22 E G -2.3220
23 D G -3.0369
24 V G -1.5491
25 G G -1.5338
26 S G -1.2590
27 N G -1.5711
28 K G -1.0008
29 G G 0.0000
30 A G -0.1342
31 I G 0.3394
32 I G 0.0000
33 G G 0.0000
34 L G 0.0000
35 M G 1.2774
36 V G 0.0000
37 G G 0.0000
38 G G 1.5032
39 V G 2.6099
40 V G 2.5499
41 I G 0.0000
42 A G 0.8132
1 G H 0.2332
2 Y H 1.5743
3 E H 0.3192
4 V H 0.8027
5 H H -0.7111
6 H H -1.5267
7 Q H -1.7289
8 K H -0.6397
9 L H 0.0000
10 V H 1.0149
11 F H 1.4386
12 F H 1.0750
13 A H -0.4350
14 E H -2.1782
15 D H -2.6836
16 V H -1.4537
17 G H -1.7232
18 S H -1.7954
19 N H -2.0916
20 K H -1.7404
21 G H -1.2597
22 A H -0.6959
23 I H 0.0000
24 I H -0.1238
25 G H -0.0853
26 L H 0.0000
27 M H 0.0000
28 V H 0.0000
29 G H 0.0000
30 G H 0.0000
31 V H 0.0000
32 V H 0.9550
33 I H 1.0868
34 A H 0.2972
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Laboratory of Theory of Biopolymers 2018