Chain sequence(s) |
A: QVQLQQSGSELKKPGASVKVSCKASGYTFTNYGVNWIKQAPGQGLQWMGWINPNTGEPTFDDDFKGRFAFSLDTSVSTAYLQISSLKADDTAVYFCSRSRGKNEAWFAYWGQGTLVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40) [INFO] Main: Simulation completed successfully. (00:00:41) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.4482 | |
2 | V | A | -0.8292 | |
3 | Q | A | -1.6654 | |
4 | L | A | 0.0000 | |
5 | Q | A | -2.1716 | |
6 | Q | A | -1.4510 | |
7 | S | A | -1.0886 | |
8 | G | A | -0.8736 | |
9 | S | A | -0.0264 | |
11 | E | A | 0.0715 | |
12 | L | A | 0.8314 | |
13 | K | A | -0.9354 | |
14 | K | A | -2.1689 | |
15 | P | A | -2.1879 | |
16 | G | A | -1.5597 | |
17 | A | A | -1.0914 | |
18 | S | A | -1.2291 | |
19 | V | A | 0.0000 | |
20 | K | A | -1.4217 | |
21 | V | A | 0.0000 | |
22 | S | A | -0.8965 | |
23 | C | A | 0.0000 | |
24 | K | A | -1.6230 | |
25 | A | A | 0.0000 | |
26 | S | A | -1.0957 | |
27 | G | A | -0.9949 | |
28 | Y | A | -0.4596 | |
29 | T | A | -0.2552 | |
30 | F | A | 0.0000 | |
35 | T | A | -0.8691 | |
36 | N | A | -1.1857 | |
37 | Y | A | -0.8765 | |
38 | G | A | -0.7137 | |
39 | V | A | 0.0000 | |
40 | N | A | 0.0000 | |
41 | W | A | 0.0000 | |
42 | I | A | 0.0000 | |
43 | K | A | 0.0207 | |
44 | Q | A | -0.3035 | |
45 | A | A | -0.9052 | |
46 | P | A | -1.0839 | |
47 | G | A | -1.1692 | |
48 | Q | A | -1.5770 | |
49 | G | A | -0.6418 | |
50 | L | A | 0.7548 | |
51 | Q | A | -0.2523 | |
52 | W | A | 0.1385 | |
53 | M | A | 0.0000 | |
54 | G | A | 0.0000 | |
55 | W | A | 0.0238 | |
56 | I | A | 0.0000 | |
57 | N | A | -0.9904 | |
58 | P | A | 0.0000 | |
59 | N | A | -1.6807 | |
62 | T | A | -1.1172 | |
63 | G | A | -1.1589 | |
64 | E | A | -1.3487 | |
65 | P | A | -0.5955 | |
66 | T | A | -0.7791 | |
67 | F | A | -1.4242 | |
68 | D | A | -2.5911 | |
69 | D | A | -3.6430 | |
70 | D | A | -3.4965 | |
71 | F | A | 0.0000 | |
72 | K | A | -3.2243 | |
74 | G | A | -1.9277 | |
75 | R | A | -1.4845 | |
76 | F | A | 0.0000 | |
77 | A | A | -0.6977 | |
78 | F | A | 0.0000 | |
79 | S | A | -0.3346 | |
80 | L | A | -0.2600 | |
81 | D | A | -0.3666 | |
82 | T | A | -0.3751 | |
83 | S | A | 0.1330 | |
84 | V | A | 0.6045 | |
85 | S | A | -0.0679 | |
86 | T | A | 0.0000 | |
87 | A | A | 0.0000 | |
88 | Y | A | -0.3747 | |
89 | L | A | 0.0000 | |
90 | Q | A | -1.0534 | |
91 | I | A | 0.0000 | |
92 | S | A | -1.0775 | |
93 | S | A | -1.2379 | |
94 | L | A | 0.0000 | |
95 | K | A | -2.8534 | |
96 | A | A | -2.0891 | |
97 | D | A | -2.3892 | |
98 | D | A | 0.0000 | |
99 | T | A | -0.7592 | |
100 | A | A | 0.0000 | |
101 | V | A | 0.4964 | |
102 | Y | A | 0.0000 | |
103 | F | A | 0.1954 | |
104 | C | A | 0.0000 | |
105 | S | A | 0.0000 | |
106 | R | A | 0.0000 | |
107 | S | A | -0.9550 | |
108 | R | A | -2.1656 | |
109 | G | A | -2.4881 | |
110 | K | A | -3.2009 | |
111 | N | A | -3.1053 | |
112 | E | A | -2.8981 | |
113 | A | A | -1.1690 | |
114 | W | A | 0.1899 | |
115 | F | A | 0.7409 | |
116 | A | A | 0.2209 | |
117 | Y | A | 0.1724 | |
118 | W | A | 0.1549 | |
119 | G | A | -1.0329 | |
120 | Q | A | -1.3875 | |
121 | G | A | -0.5473 | |
122 | T | A | 0.0000 | |
123 | L | A | 0.6762 | |
124 | V | A | 0.0000 | |
125 | T | A | -0.1678 | |
126 | V | A | 0.0000 | |
127 | S | A | -1.1299 | |
128 | S | A | -1.1739 |