| Chain sequence(s) |
H: QVQLVESGGGLVQAGGSLRLSCAASGRLFLTYAMGWFRQAPGKEREFVTGISWSGDNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAHQGLLHGTRWSSPFEYNYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.8268 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.3083 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.9634 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4324 | |
| 8 | G | H | -0.8870 | |
| 9 | G | H | -0.4726 | |
| 11 | G | H | 0.1485 | |
| 12 | L | H | 1.1718 | |
| 13 | V | H | 0.0918 | |
| 14 | Q | H | -1.2401 | |
| 15 | A | H | -1.4874 | |
| 16 | G | H | -1.3622 | |
| 17 | G | H | -0.8995 | |
| 18 | S | H | -1.0050 | |
| 19 | L | H | -0.4549 | |
| 20 | R | H | -1.2694 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1813 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2702 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.4473 | |
| 27 | G | H | -1.9971 | |
| 28 | R | H | -2.0329 | |
| 29 | L | H | -0.9162 | |
| 30 | F | H | 0.0000 | |
| 35 | L | H | 0.6459 | |
| 36 | T | H | 0.5028 | |
| 37 | Y | H | 0.0000 | |
| 38 | A | H | 0.3003 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.5022 | |
| 45 | A | H | -1.5933 | |
| 46 | P | H | -1.2765 | |
| 47 | G | H | -1.8441 | |
| 48 | K | H | -3.0390 | |
| 49 | E | H | -3.1402 | |
| 50 | R | H | -2.0030 | |
| 51 | E | H | -1.3345 | |
| 52 | F | H | -0.2395 | |
| 53 | V | H | 0.0000 | |
| 54 | T | H | 0.0000 | |
| 55 | G | H | 0.1211 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | -0.2599 | |
| 58 | W | H | 0.3002 | |
| 59 | S | H | -0.4856 | |
| 62 | G | H | -1.1364 | |
| 63 | D | H | -2.1289 | |
| 64 | N | H | -1.3249 | |
| 65 | T | H | -0.1814 | |
| 66 | Y | H | 0.4379 | |
| 67 | Y | H | -0.3944 | |
| 68 | A | H | -1.1192 | |
| 69 | D | H | -2.4237 | |
| 70 | S | H | -1.7914 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4982 | |
| 74 | G | H | -1.8007 | |
| 75 | R | H | -1.7167 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.5890 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5574 | |
| 80 | R | H | -0.8089 | |
| 81 | D | H | -1.1406 | |
| 82 | N | H | -0.8827 | |
| 83 | A | H | -1.0786 | |
| 84 | K | H | -2.2157 | |
| 85 | N | H | -1.5040 | |
| 86 | T | H | -0.7982 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3034 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.8541 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2695 | |
| 93 | S | H | -1.2470 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.5273 | |
| 96 | P | H | -1.9497 | |
| 97 | E | H | -2.3861 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7995 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1341 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0574 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | H | H | 0.0000 | |
| 108 | Q | H | -0.5280 | |
| 109 | G | H | -0.1046 | |
| 110 | L | H | 1.1452 | |
| 111 | L | H | 0.1814 | |
| 111A | H | H | -0.5996 | |
| 111B | G | H | -0.6774 | |
| 111C | T | H | -1.0688 | |
| 112D | R | H | -1.6120 | |
| 112C | W | H | -0.4858 | |
| 112B | S | H | -0.1953 | |
| 112A | S | H | 0.2101 | |
| 112 | P | H | 0.5198 | |
| 113 | F | H | 1.5357 | |
| 114 | E | H | 0.1992 | |
| 115 | Y | H | 0.0000 | |
| 116 | N | H | -1.0208 | |
| 117 | Y | H | -0.7065 | |
| 118 | W | H | -0.0442 | |
| 119 | G | H | -0.1141 | |
| 120 | Q | H | -0.8498 | |
| 121 | G | H | -0.3443 | |
| 122 | T | H | -0.4541 | |
| 123 | Q | H | -0.5034 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1856 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8085 | |
| 128 | S | H | -0.9064 |