Chain sequence(s) |
A: YAEGTFTSDYSIALDKIAQQEFVQWLLAGGPSSGAPPPS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | AD28A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.214767 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:09) [INFO] FoldX: Starting FoldX energy minimalization (00:00:10) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19) [INFO] Main: Simulation completed successfully. (00:00:19) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Y | A | 0.8701 | |
2 | A | A | 0.0724 | |
3 | E | A | -1.2344 | |
4 | G | A | -0.6012 | |
5 | T | A | -0.0527 | |
6 | F | A | 1.0936 | |
7 | T | A | 0.2207 | |
8 | S | A | 0.0239 | |
9 | D | A | -0.4644 | |
10 | Y | A | 1.0009 | |
11 | S | A | 0.5415 | |
12 | I | A | 0.6168 | |
13 | A | A | 0.2096 | |
14 | L | A | 0.4055 | |
15 | D | A | -1.7624 | |
16 | K | A | -1.6699 | |
17 | I | A | 0.0408 | |
18 | A | A | -1.1223 | |
19 | Q | A | -2.1431 | |
20 | Q | A | -2.0061 | |
21 | E | A | -1.7420 | |
22 | F | A | -0.2708 | |
23 | V | A | 0.1422 | |
24 | Q | A | -1.1465 | |
25 | W | A | -0.4473 | |
26 | L | A | 0.8340 | |
27 | L | A | 0.8649 | |
28 | D | A | -1.0301 | mutated: AD28A |
29 | G | A | -0.5745 | |
30 | G | A | 0.0000 | |
31 | P | A | -0.6938 | |
32 | S | A | -0.7379 | |
33 | S | A | -0.7079 | |
34 | G | A | -0.9565 | |
35 | A | A | -0.6730 | |
36 | P | A | -0.5096 | |
37 | P | A | -0.4078 | |
38 | P | A | -0.6055 | |
39 | S | A | -0.5396 |