Project name: query_structure

Status: done

Started: 2026-03-17 01:15:19
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAGVGNYKYWWGSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:32)
Show buried residues

Minimal score value
-3.3696
Maximal score value
1.5231
Average score
-0.4774
Total score value
-44.8802

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.5231
2 S A 0.1257
3 D A -0.3454
4 V A -0.8025
5 P A 0.0000
6 R A -3.0886
7 D A -3.3696
8 L A 0.0000
9 E A -2.1350
10 V A 0.0644
11 V A 1.5129
12 A A 0.8718
13 A A 0.2845
14 T A -0.5556
15 P A -1.1651
16 T A -1.0151
17 S A -0.5554
18 L A 0.0000
19 L A 0.6945
20 I A 0.0000
21 S A -0.9496
22 W A 0.0000
23 D A -3.0941
24 A A -1.6487
25 S A -1.1019
26 S A -0.2682
27 S A -0.3544
28 S A -0.1805
29 V A 0.0000
30 S A -0.1205
31 Y A -0.0023
32 Y A 0.0000
33 R A -0.4372
34 I A 0.0000
35 T A 0.0000
36 Y A 0.0000
37 G A 0.0000
38 E A -1.4571
39 T A -1.2006
40 G A -1.2085
41 G A -1.3246
42 N A -1.5090
43 S A -0.7981
44 P A -0.2932
45 V A 0.4615
46 Q A -0.7836
47 E A -1.5926
48 F A -0.6535
49 T A -0.2937
50 V A 0.0000
51 P A -0.3739
52 G A -0.2105
53 S A -0.4117
54 S A -0.4852
55 S A -0.6572
56 T A -0.2932
57 A A 0.0000
58 T A 0.2755
59 I A 0.0000
60 S A -0.6665
61 G A -1.0367
62 L A 0.0000
63 K A -2.3542
64 P A -1.6534
65 G A -1.4225
66 V A -1.3807
67 D A -1.9940
68 Y A 0.0000
69 T A -0.7512
70 I A 0.0000
71 T A -0.2125
72 V A 0.0000
73 Y A 0.1461
74 A A 0.0000
75 G A 0.0000
76 V A 0.8505
77 G A -0.0033
78 N A -0.7912
79 Y A 0.6250
80 K A -0.5323
81 Y A 1.1521
82 W A 1.1690
83 W A 1.3505
84 G A 0.3754
85 S A 0.2464
86 S A -0.1994
87 P A -0.3251
88 I A -0.3034
89 S A -0.4005
90 I A -0.7333
91 N A -1.7046
92 Y A -1.4182
93 R A -2.4878
94 T A -1.5024
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Laboratory of Theory of Biopolymers 2018