| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAGVGNYKYWWGSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.5231 | |
| 2 | S | A | 0.1257 | |
| 3 | D | A | -0.3454 | |
| 4 | V | A | -0.8025 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.0886 | |
| 7 | D | A | -3.3696 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1350 | |
| 10 | V | A | 0.0644 | |
| 11 | V | A | 1.5129 | |
| 12 | A | A | 0.8718 | |
| 13 | A | A | 0.2845 | |
| 14 | T | A | -0.5556 | |
| 15 | P | A | -1.1651 | |
| 16 | T | A | -1.0151 | |
| 17 | S | A | -0.5554 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.6945 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9496 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.0941 | |
| 24 | A | A | -1.6487 | |
| 25 | S | A | -1.1019 | |
| 26 | S | A | -0.2682 | |
| 27 | S | A | -0.3544 | |
| 28 | S | A | -0.1805 | |
| 29 | V | A | 0.0000 | |
| 30 | S | A | -0.1205 | |
| 31 | Y | A | -0.0023 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.4372 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4571 | |
| 39 | T | A | -1.2006 | |
| 40 | G | A | -1.2085 | |
| 41 | G | A | -1.3246 | |
| 42 | N | A | -1.5090 | |
| 43 | S | A | -0.7981 | |
| 44 | P | A | -0.2932 | |
| 45 | V | A | 0.4615 | |
| 46 | Q | A | -0.7836 | |
| 47 | E | A | -1.5926 | |
| 48 | F | A | -0.6535 | |
| 49 | T | A | -0.2937 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.3739 | |
| 52 | G | A | -0.2105 | |
| 53 | S | A | -0.4117 | |
| 54 | S | A | -0.4852 | |
| 55 | S | A | -0.6572 | |
| 56 | T | A | -0.2932 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2755 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6665 | |
| 61 | G | A | -1.0367 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3542 | |
| 64 | P | A | -1.6534 | |
| 65 | G | A | -1.4225 | |
| 66 | V | A | -1.3807 | |
| 67 | D | A | -1.9940 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7512 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.2125 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.1461 | |
| 74 | A | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | V | A | 0.8505 | |
| 77 | G | A | -0.0033 | |
| 78 | N | A | -0.7912 | |
| 79 | Y | A | 0.6250 | |
| 80 | K | A | -0.5323 | |
| 81 | Y | A | 1.1521 | |
| 82 | W | A | 1.1690 | |
| 83 | W | A | 1.3505 | |
| 84 | G | A | 0.3754 | |
| 85 | S | A | 0.2464 | |
| 86 | S | A | -0.1994 | |
| 87 | P | A | -0.3251 | |
| 88 | I | A | -0.3034 | |
| 89 | S | A | -0.4005 | |
| 90 | I | A | -0.7333 | |
| 91 | N | A | -1.7046 | |
| 92 | Y | A | -1.4182 | |
| 93 | R | A | -2.4878 | |
| 94 | T | A | -1.5024 |