| Chain sequence(s) |
A: MSLLIIGMGGTIASVKGESGYESALSIEEIIEISGIREKIGSSIDTIDLMNVDSTLIQPSDWKTLAEEIERNIWDYDGIVITHGTDTMAYTASMLSFMLRNPPVPIVFTGSMLPASEKNSDAPLNLYTALKFAETGIRSIYIAFNGKVMLGVRASKVRSMNFDAFESINYPLIAKLEDDIKILHIPRIYGDEFSSDFRYNHKVLVLKLIPGLSGDVFEAALKIGYRGIVIEGYGVGGIPYRGTNLFEVISKISREIPIVLTTQALYDGVDLERYKVGRMALNAGIIPAGDMTKEATVTKLMWILGHTRKIEEVRELMGKNLAGELTRVF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:43)
[INFO] Main: Simulation completed successfully. (00:06:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4970 | |
| 2 | S | A | -0.5326 | |
| 3 | L | A | 0.0000 | |
| 4 | L | A | 0.0000 | |
| 5 | I | A | 0.0000 | |
| 6 | I | A | 0.0000 | |
| 7 | G | A | 0.0000 | |
| 8 | M | A | 0.0000 | |
| 9 | G | A | 0.0000 | |
| 10 | G | A | 0.0000 | |
| 11 | T | A | -0.3267 | |
| 12 | I | A | 0.0000 | |
| 13 | A | A | 0.0000 | |
| 14 | S | A | 0.0000 | |
| 15 | V | A | -0.7469 | |
| 16 | K | A | -2.1630 | |
| 17 | G | A | -2.0007 | |
| 18 | E | A | -2.4552 | |
| 19 | S | A | -1.5425 | |
| 20 | G | A | -1.2029 | |
| 21 | Y | A | -0.9265 | |
| 22 | E | A | -2.1969 | |
| 23 | S | A | -1.1909 | |
| 24 | A | A | -0.6237 | |
| 25 | L | A | -0.7809 | |
| 26 | S | A | -1.0173 | |
| 27 | I | A | 0.0000 | |
| 28 | E | A | -1.9649 | |
| 29 | E | A | -1.8754 | |
| 30 | I | A | 0.0000 | |
| 31 | I | A | 0.0000 | |
| 32 | E | A | -2.2610 | |
| 33 | I | A | -0.1386 | |
| 34 | S | A | 0.0000 | |
| 35 | G | A | -1.4451 | |
| 36 | I | A | 0.0000 | |
| 37 | R | A | -2.6979 | |
| 38 | E | A | -3.1677 | |
| 39 | K | A | -2.4406 | |
| 40 | I | A | 0.0000 | |
| 41 | G | A | -1.1888 | |
| 42 | S | A | -0.7881 | |
| 43 | S | A | -0.4782 | |
| 44 | I | A | 0.0000 | |
| 45 | D | A | -1.1592 | |
| 46 | T | A | -0.8180 | |
| 47 | I | A | -0.5109 | |
| 48 | D | A | -1.3216 | |
| 49 | L | A | -0.4023 | |
| 50 | M | A | -0.5158 | |
| 51 | N | A | -1.1891 | |
| 52 | V | A | -0.5212 | |
| 53 | D | A | -1.3442 | |
| 54 | S | A | 0.0000 | |
| 55 | T | A | -0.3487 | |
| 56 | L | A | 0.6427 | |
| 57 | I | A | 0.0000 | |
| 58 | Q | A | -1.2008 | |
| 59 | P | A | -1.1547 | |
| 60 | S | A | -1.0630 | |
| 61 | D | A | -0.8958 | |
| 62 | W | A | 0.0000 | |
| 63 | K | A | -1.6343 | |
| 64 | T | A | -0.9193 | |
| 65 | L | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | E | A | -1.9909 | |
| 68 | E | A | -1.6029 | |
| 69 | I | A | 0.0000 | |
| 70 | E | A | -1.5229 | |
| 71 | R | A | -2.4944 | |
| 72 | N | A | -1.5566 | |
| 73 | I | A | 0.0000 | |
| 74 | W | A | -0.2171 | |
| 75 | D | A | -1.6894 | |
| 76 | Y | A | -0.8552 | |
| 77 | D | A | -1.0857 | |
| 78 | G | A | 0.0000 | |
| 79 | I | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | T | A | 0.0000 | |
| 83 | H | A | 0.0000 | |
| 84 | G | A | 0.0000 | |
| 85 | T | A | 0.0000 | |
| 86 | D | A | -1.9717 | |
| 87 | T | A | -0.9674 | |
| 88 | M | A | 0.0000 | |
| 89 | A | A | 0.0000 | |
| 90 | Y | A | -0.1977 | |
| 91 | T | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | M | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | S | A | 0.0000 | |
| 97 | F | A | 0.0000 | |
| 98 | M | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | R | A | -0.8622 | |
| 101 | N | A | -1.2666 | |
| 102 | P | A | 0.0000 | |
| 103 | P | A | -0.6967 | |
| 104 | V | A | -0.6408 | |
| 105 | P | A | 0.0000 | |
| 106 | I | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | F | A | 0.0000 | |
| 109 | T | A | 0.0000 | |
| 110 | G | A | 0.0000 | |
| 111 | S | A | 0.0000 | |
| 112 | M | A | 0.2891 | |
| 113 | L | A | 0.1859 | |
| 114 | P | A | 0.0000 | |
| 115 | A | A | 0.0000 | |
| 116 | S | A | -0.9248 | |
| 117 | E | A | -1.7742 | |
| 118 | K | A | -2.6062 | |
| 119 | N | A | -2.2232 | |
| 120 | S | A | -1.0620 | |
| 121 | D | A | 0.0000 | |
| 122 | A | A | 0.0000 | |
| 123 | P | A | 0.1340 | |
| 124 | L | A | 0.6040 | |
| 125 | N | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | Y | A | 0.1116 | |
| 128 | T | A | 0.0000 | |
| 129 | A | A | 0.0000 | |
| 130 | L | A | 0.0000 | |
| 131 | K | A | -0.7018 | |
| 132 | F | A | 0.0000 | |
| 133 | A | A | 0.0000 | |
| 134 | E | A | -0.4563 | |
| 135 | T | A | -0.5893 | |
| 136 | G | A | -0.7762 | |
| 137 | I | A | -0.2943 | |
| 138 | R | A | -1.6283 | |
| 139 | S | A | -0.7352 | |
| 140 | I | A | 0.0000 | |
| 141 | Y | A | 0.0000 | |
| 142 | I | A | 0.0000 | |
| 143 | A | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | N | A | -0.4501 | |
| 146 | G | A | -0.6344 | |
| 147 | K | A | -0.9257 | |
| 148 | V | A | 0.0000 | |
| 149 | M | A | 0.0000 | |
| 150 | L | A | 0.0000 | |
| 151 | G | A | 0.0000 | |
| 152 | V | A | 0.0000 | |
| 153 | R | A | 0.0000 | |
| 154 | A | A | 0.0000 | |
| 155 | S | A | 0.0000 | |
| 156 | K | A | -0.8487 | |
| 157 | V | A | -0.0251 | |
| 158 | R | A | -0.8772 | |
| 159 | S | A | -0.4743 | |
| 160 | M | A | 0.5383 | |
| 161 | N | A | -0.3783 | |
| 162 | F | A | 0.0887 | |
| 163 | D | A | -0.6148 | |
| 164 | A | A | 0.0000 | |
| 165 | F | A | 0.0000 | |
| 166 | E | A | -0.4203 | |
| 167 | S | A | 0.0000 | |
| 168 | I | A | 0.0000 | |
| 169 | N | A | -0.3130 | |
| 170 | Y | A | 0.0384 | |
| 171 | P | A | 0.2510 | |
| 172 | L | A | 0.4377 | |
| 173 | I | A | 0.0000 | |
| 174 | A | A | 0.0000 | |
| 175 | K | A | -1.6168 | |
| 176 | L | A | -2.1007 | |
| 177 | E | A | -3.5648 | |
| 178 | D | A | -3.5897 | |
| 179 | D | A | -3.3017 | |
| 180 | I | A | -1.9420 | |
| 181 | K | A | -1.8790 | |
| 182 | I | A | 0.7248 | |
| 183 | L | A | 1.2015 | |
| 184 | H | A | 1.0600 | |
| 185 | I | A | 1.7601 | |
| 186 | P | A | 0.0000 | |
| 187 | R | A | -1.0178 | |
| 188 | I | A | -0.3508 | |
| 189 | Y | A | -0.6212 | |
| 190 | G | A | -1.6970 | |
| 191 | D | A | -2.6900 | |
| 192 | E | A | -2.7061 | |
| 193 | F | A | -1.4080 | |
| 194 | S | A | -1.1263 | |
| 195 | S | A | -0.7223 | |
| 196 | D | A | -1.0810 | |
| 197 | F | A | -1.1541 | |
| 198 | R | A | -1.9768 | |
| 199 | Y | A | -1.3064 | |
| 200 | N | A | -1.4125 | |
| 201 | H | A | -1.6177 | |
| 202 | K | A | -1.1335 | |
| 203 | V | A | 0.0000 | |
| 204 | L | A | 0.0722 | |
| 205 | V | A | 0.2617 | |
| 206 | L | A | 0.0000 | |
| 207 | K | A | -1.0796 | |
| 208 | L | A | 0.0000 | |
| 209 | I | A | 0.8916 | |
| 210 | P | A | 0.2468 | |
| 211 | G | A | -0.4842 | |
| 212 | L | A | -0.1195 | |
| 213 | S | A | -0.7247 | |
| 214 | G | A | 0.0000 | |
| 215 | D | A | -1.9077 | |
| 216 | V | A | -0.6848 | |
| 217 | F | A | 0.0000 | |
| 218 | E | A | -1.6530 | |
| 219 | A | A | -0.6846 | |
| 220 | A | A | 0.0000 | |
| 221 | L | A | -0.8040 | |
| 222 | K | A | -0.7892 | |
| 223 | I | A | 0.9811 | |
| 224 | G | A | 0.1446 | |
| 225 | Y | A | -0.4034 | |
| 226 | R | A | -1.4673 | |
| 227 | G | A | 0.0000 | |
| 228 | I | A | 0.0000 | |
| 229 | V | A | 0.0000 | |
| 230 | I | A | 0.0000 | |
| 231 | E | A | -0.7224 | |
| 232 | G | A | 0.0000 | |
| 233 | Y | A | 0.1744 | |
| 234 | G | A | -0.3174 | |
| 235 | V | A | -0.3385 | |
| 236 | G | A | 0.0000 | |
| 237 | G | A | 0.0180 | |
| 238 | I | A | 0.0000 | |
| 239 | P | A | -0.5850 | |
| 240 | Y | A | -1.0994 | |
| 241 | R | A | -2.0911 | |
| 242 | G | A | -1.5232 | |
| 243 | T | A | -1.4301 | |
| 244 | N | A | -1.9222 | |
| 245 | L | A | 0.0000 | |
| 246 | F | A | 0.0000 | |
| 247 | E | A | -2.4158 | |
| 248 | V | A | 0.0000 | |
| 249 | I | A | 0.0000 | |
| 250 | S | A | -2.1418 | |
| 251 | K | A | -3.1566 | |
| 252 | I | A | 0.0000 | |
| 253 | S | A | 0.0000 | |
| 254 | R | A | -3.1844 | |
| 255 | E | A | -3.4776 | |
| 256 | I | A | 0.0000 | |
| 257 | P | A | 0.0000 | |
| 258 | I | A | 0.0000 | |
| 259 | V | A | 0.0000 | |
| 260 | L | A | 0.0000 | |
| 261 | T | A | 0.0000 | |
| 262 | T | A | -0.4476 | |
| 263 | Q | A | -0.4153 | |
| 264 | A | A | 0.1496 | |
| 265 | L | A | 0.7811 | |
| 266 | Y | A | 0.2811 | |
| 267 | D | A | -1.4443 | |
| 268 | G | A | 0.0000 | |
| 269 | V | A | 0.0000 | |
| 270 | D | A | -0.9035 | |
| 271 | L | A | 0.0000 | |
| 272 | E | A | -2.6713 | |
| 273 | R | A | -2.4504 | |
| 274 | Y | A | -1.1582 | |
| 275 | K | A | -1.9962 | |
| 276 | V | A | -0.9516 | |
| 277 | G | A | 0.0000 | |
| 278 | R | A | -2.4972 | |
| 279 | M | A | -0.9760 | |
| 280 | A | A | 0.0000 | |
| 281 | L | A | -0.9861 | |
| 282 | N | A | -1.2886 | |
| 283 | A | A | -1.4281 | |
| 284 | G | A | -1.2738 | |
| 285 | I | A | 0.0000 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.2996 | |
| 288 | A | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | D | A | 0.0000 | |
| 291 | M | A | 0.0000 | |
| 292 | T | A | 0.0000 | |
| 293 | K | A | -0.7050 | |
| 294 | E | A | -0.5081 | |
| 295 | A | A | 0.0000 | |
| 296 | T | A | 0.0000 | |
| 297 | V | A | 0.0000 | |
| 298 | T | A | 0.0000 | |
| 299 | K | A | 0.0000 | |
| 300 | L | A | 0.0000 | |
| 301 | M | A | -0.7702 | |
| 302 | W | A | 0.0000 | |
| 303 | I | A | 0.0000 | |
| 304 | L | A | 0.0000 | |
| 305 | G | A | -1.4418 | |
| 306 | H | A | -1.5050 | |
| 307 | T | A | -1.9283 | |
| 308 | R | A | -3.3838 | |
| 309 | K | A | -3.4929 | |
| 310 | I | A | -3.1314 | |
| 311 | E | A | -3.4735 | |
| 312 | E | A | -3.3938 | |
| 313 | V | A | 0.0000 | |
| 314 | R | A | -2.5916 | |
| 315 | E | A | -3.0478 | |
| 316 | L | A | -1.7495 | |
| 317 | M | A | 0.0000 | |
| 318 | G | A | -1.1205 | |
| 319 | K | A | -1.6392 | |
| 320 | N | A | -0.7000 | |
| 321 | L | A | 0.0000 | |
| 322 | A | A | -0.3181 | |
| 323 | G | A | 0.0000 | |
| 324 | E | A | 0.0000 | |
| 325 | L | A | 0.0000 | |
| 326 | T | A | -0.4974 | |
| 327 | R | A | -0.7979 | |
| 328 | V | A | 1.1874 | |
| 329 | F | A | 0.7412 |