| Chain sequence(s) |
B: SLAEIDAFAEGVEKAKKVALELAKQAGLDLEEVKKKLAEIEKIVEKLKAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.2441 | |
| 2 | L | B | 0.5008 | |
| 3 | A | B | -0.4229 | |
| 4 | E | B | -1.5168 | |
| 5 | I | B | -1.0838 | |
| 6 | D | B | -2.0842 | |
| 7 | A | B | -1.2987 | |
| 8 | F | B | -0.5530 | |
| 9 | A | B | -2.0273 | |
| 10 | E | B | -3.0715 | |
| 11 | G | B | -1.9237 | |
| 12 | V | B | -1.7589 | |
| 13 | E | B | -3.0866 | |
| 14 | K | B | -3.0384 | |
| 15 | A | B | -1.8348 | |
| 16 | K | B | -2.3627 | |
| 17 | K | B | -2.1938 | |
| 18 | V | B | -0.2764 | |
| 19 | A | B | -0.7130 | |
| 20 | L | B | -1.5824 | |
| 21 | E | B | -1.6935 | |
| 22 | L | B | 0.0304 | |
| 23 | A | B | 0.0000 | |
| 24 | K | B | -2.1475 | |
| 25 | Q | B | -1.7426 | |
| 26 | A | B | -0.8715 | |
| 27 | G | B | -1.0451 | |
| 28 | L | B | -0.7175 | |
| 29 | D | B | -2.7161 | |
| 30 | L | B | -2.9346 | |
| 31 | E | B | -4.1340 | |
| 32 | E | B | -4.3283 | |
| 33 | V | B | -3.3535 | |
| 34 | K | B | -4.4302 | |
| 35 | K | B | -4.6565 | |
| 36 | K | B | -4.0397 | |
| 37 | L | B | 0.0000 | |
| 38 | A | B | -2.8630 | |
| 39 | E | B | -3.1428 | |
| 40 | I | B | -1.6010 | |
| 41 | E | B | -2.6500 | |
| 42 | K | B | -2.7559 | |
| 43 | I | B | -0.5376 | |
| 44 | V | B | 0.0000 | |
| 45 | E | B | -3.3403 | |
| 46 | K | B | -2.6615 | |
| 47 | L | B | -1.3601 | |
| 48 | K | B | -2.3684 | |
| 49 | A | B | -1.4690 | |
| 50 | A | B | -0.8137 |