Project name: cofilin

Status: done

Started: 2026-06-05 07:23:28
Settings
Chain sequence(s) 1: MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIKHELQANCYEEVKDRATLAEKLGGSAVISLEGKPL
input PDB
Selected Chain(s) 1
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with 1 chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:22)
Show buried residues

Minimal score value
-3.7346
Maximal score value
1.0403
Average score
-1.1719
Total score value
-194.5291

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M 1 0.9478
2 A 1 -0.0745
3 S 1 -0.5788
4 G 1 -1.0170
5 V 1 0.0000
6 A 1 -0.9319
7 V 1 -0.5862
8 S 1 -1.0095
9 D 1 -2.1770
10 G 1 -1.5984
11 V 1 0.0000
12 I 1 -1.5965
13 K 1 -2.7273
14 V 1 -1.8041
15 F 1 0.0000
16 N 1 -2.2163
17 D 1 -2.4366
18 M 1 0.0000
19 K 1 -2.2581
20 V 1 -1.5657
21 R 1 -2.6846
22 K 1 -2.7653
23 S 1 -1.5475
24 S 1 -1.5299
25 T 1 -1.6050
26 P 1 -2.3524
27 E 1 -3.3932
28 E 1 -3.2740
29 V 1 0.0000
30 K 1 -3.5210
31 K 1 -3.5310
32 R 1 -2.5146
33 K 1 -1.5551
34 K 1 0.0000
35 A 1 0.0000
36 V 1 0.0000
37 L 1 0.0000
38 F 1 0.0000
39 C 1 -0.3318
40 L 1 0.0000
41 S 1 -2.2279
42 E 1 -3.3445
43 D 1 -3.7346
44 K 1 -3.1980
45 K 1 -3.2665
46 N 1 -1.9850
47 I 1 0.0000
48 I 1 0.0263
49 L 1 -0.2204
50 E 1 -1.2142
51 E 1 -2.3098
52 G 1 -1.8286
53 K 1 -1.7163
54 E 1 -1.2481
55 I 1 0.0000
56 L 1 -0.9021
57 V 1 -1.2765
58 G 1 -2.0128
59 D 1 -1.5955
60 V 1 -1.1739
61 G 1 -1.6739
62 Q 1 -1.9068
63 T 1 -1.2064
64 V 1 -1.1515
65 D 1 -2.2255
66 D 1 -1.3536
67 P 1 0.0000
68 Y 1 0.0000
69 A 1 -1.1000
70 T 1 -0.9380
71 F 1 0.0000
72 V 1 0.0000
73 K 1 -1.9663
74 M 1 -1.2071
75 L 1 0.0000
76 P 1 -2.0239
77 D 1 -3.4576
78 K 1 -3.5618
79 D 1 -2.8060
80 C 1 0.0000
81 R 1 -0.6679
82 Y 1 0.0000
83 A 1 0.0000
84 L 1 0.0000
85 Y 1 0.0000
86 D 1 0.0000
87 A 1 0.0000
88 T 1 -1.6666
89 Y 1 0.0000
90 E 1 -2.4168
91 T 1 -2.1220
92 K 1 -2.8469
93 E 1 -3.2530
94 S 1 -2.9268
95 K 1 -3.4212
96 K 1 -3.1243
97 E 1 -2.9728
98 D 1 -1.7254
99 L 1 -0.9809
100 V 1 0.0000
101 F 1 0.0000
102 I 1 0.0000
103 F 1 0.0000
104 W 1 0.0000
105 A 1 0.0000
106 P 1 0.0000
107 E 1 -2.5349
108 S 1 -2.1023
109 A 1 0.0000
110 P 1 -0.6769
111 L 1 0.6386
112 K 1 -0.5744
113 S 1 -0.4389
114 K 1 -0.0896
115 M 1 1.0403
116 I 1 0.8589
117 Y 1 0.0000
118 A 1 0.3555
119 S 1 0.5051
120 S 1 0.0000
121 K 1 -0.7905
122 D 1 -1.7483
123 A 1 0.0000
124 I 1 0.0000
125 K 1 -2.0930
126 K 1 -2.7365
127 K 1 -1.9571
128 L 1 0.0000
129 T 1 -1.3365
130 G 1 -1.3789
131 I 1 -1.4754
132 K 1 -1.8713
133 H 1 -1.3347
134 E 1 -1.2225
135 L 1 0.0000
136 Q 1 -1.3585
137 A 1 0.0000
138 N 1 -1.8711
139 C 1 -1.9327
140 Y 1 -2.3198
141 E 1 -3.0808
142 E 1 -3.3055
143 V 1 0.0000
144 K 1 -2.9245
145 D 1 -2.3195
146 R 1 -1.2833
147 A 1 -1.1254
148 T 1 -1.7010
149 L 1 0.0000
150 A 1 0.0000
151 E 1 -2.3561
152 K 1 -2.1374
153 L 1 0.0000
154 G 1 -1.2802
155 G 1 -1.5246
156 S 1 -0.8101
157 A 1 -0.9313
158 V 1 0.0000
159 I 1 -0.0175
160 S 1 0.0000
161 L 1 0.0000
162 E 1 -0.9389
163 G 1 -0.8168
164 K 1 -0.4088
165 P 1 0.2067
166 L 1 0.8382
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Laboratory of Theory of Biopolymers 2018