Project name: 20.23E5

Status: done

Started: 2026-07-07 08:39:10
Settings
Chain sequence(s) H: QVQLQQPGTELVKPGASVKLSCKASGYTFTSYWMHWLRQRPGQGLEWIGNINPNNGGTKYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCASPAYWGQGTLVTVSA
L: DIQMTQSPSSLSASLGERVSLTCRASQEISGYLNWLQQKPDGTIKRLIYAASILDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:50)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:51)
Show buried residues

Minimal score value
-3.3287
Maximal score value
1.6617
Average score
-0.6382
Total score value
-139.7652

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5537
2 V H -0.9900
3 Q H -1.9252
4 L H 0.0000
5 Q H -2.1564
6 Q H 0.0000
7 P H -0.9248
8 G H -0.8382
9 T H -0.0570
11 E H -0.1067
12 L H 0.9973
13 V H -0.1496
14 K H -1.5185
15 P H -1.2369
16 G H -1.0618
17 A H -0.8468
18 S H -1.0607
19 V H 0.0000
20 K H -1.9901
21 L H 0.0000
22 S H -0.8883
23 C H 0.0000
24 K H -1.8543
25 A H 0.0000
26 S H -1.3285
27 G H -1.0628
28 Y H -0.2920
29 T H 0.0918
30 F H 0.0000
35 T H -0.7597
36 S H 0.1674
37 Y H 1.0842
38 W H 0.6379
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 L H 0.0000
43 R H 0.0000
44 Q H -0.7986
45 R H -1.4044
46 P H -1.0305
47 G H -1.3504
48 Q H -1.9055
49 G H -1.2113
50 L H 0.0000
51 E H -0.8019
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 N H 0.0000
56 I H 0.0000
57 N H -0.8171
58 P H 0.0000
59 N H -2.1332
62 N H -2.2634
63 G H -1.5133
64 G H -1.1618
65 T H -0.7868
66 K H -1.3307
67 Y H -1.4976
68 N H -2.2118
69 E H -3.3287
70 K H -3.1808
71 F H 0.0000
72 K H -3.1047
74 S H -1.7641
75 K H -1.4785
76 A H 0.0000
77 T H -0.7685
78 L H 0.0000
79 T H -0.4680
80 V H -0.9648
81 D H -1.4642
82 K H -2.4326
83 S H -1.2220
84 S H -1.0679
85 S H -1.2311
86 T H 0.0000
87 A H 0.0000
88 Y H -0.4698
89 M H 0.0000
90 Q H -1.2890
91 L H 0.0000
92 S H -0.8450
93 S H -0.7799
94 L H 0.0000
95 T H -1.2609
96 S H -1.4168
97 E H -2.0223
98 D H 0.0000
99 S H -0.6024
100 A H 0.0000
101 V H 0.0534
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 S H 0.0000
107 P H 0.5048
116 A H 0.2277
117 Y H 0.4548
118 W H -0.1847
119 G H 0.0000
120 Q H -1.3450
121 G H 0.0000
122 T H 0.0000
123 L H 0.2718
124 V H 0.0000
125 T H 0.0260
126 V H 0.0000
127 S H -0.4406
128 A H -0.3838
1 D L -2.1100
2 I L 0.0000
3 Q L -2.2453
4 M L 0.0000
5 T L -1.3503
6 Q L -1.0767
7 S L -0.7512
8 P L -0.5201
9 S L -0.6870
10 S L -0.7676
11 L L -0.4875
12 S L -0.8781
13 A L 0.0000
14 S L -1.2706
15 L L -0.6439
16 G L -1.5262
17 E L -2.6533
18 R L -2.6320
19 V L 0.0000
20 S L -0.6356
21 L L 0.0000
22 T L -0.8357
23 C L 0.0000
24 R L -2.8682
25 A L 0.0000
26 S L -2.3002
27 Q L -2.8049
28 E L -2.6559
29 I L 0.0000
36 S L -0.6410
37 G L 0.0336
38 Y L 1.0481
39 L L 0.0000
40 N L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.4331
46 P L -1.2842
47 D L -2.2003
48 G L -1.4435
49 T L -1.1929
50 I L 0.0000
51 K L -0.7233
52 R L -0.3550
53 L L 0.0000
54 I L 0.0000
55 Y L 1.1120
56 A L 0.9122
57 A L 0.0000
65 S L 0.4360
66 I L 1.6617
67 L L 0.5041
68 D L -0.1557
69 S L -0.3187
70 G L -0.8201
71 V L 0.0000
72 P L -1.1209
74 K L -1.9177
75 R L -1.5194
76 F L 0.0000
77 S L -0.4016
78 G L -0.0810
79 S L -0.6593
80 R L -1.5167
83 S L -1.2100
84 G L -1.4252
85 S L -1.9833
86 D L -1.8718
87 Y L 0.0000
88 S L -0.8394
89 L L 0.0000
90 T L -0.6395
91 I L 0.0000
92 S L -1.7020
93 S L -1.7212
94 L L 0.0000
95 E L -1.7417
96 S L -1.2603
97 E L -1.9830
98 D L 0.0000
99 F L -0.5643
100 A L 0.0000
101 D L -0.8229
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.8520
108 A L 0.3984
109 S L 0.3006
114 Y L 0.2509
115 P L -0.5056
116 W L 0.0678
117 T L -0.4211
118 F L -0.2225
119 G L 0.0000
120 G L -1.0061
121 G L 0.0000
122 T L 0.0000
123 K L -1.1027
124 L L 0.0000
125 E L -1.1294
126 I L -0.3353
127 K L -1.5513
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Laboratory of Theory of Biopolymers 2018