Project name: 5d4427c611e30e1

Status: done

Started: 2026-07-01 15:22:24
Settings
Chain sequence(s) B: SSLLAEELERRRNAELEAQLSAALQQDQQDGTYVWQVDGEVVARHLVRRA
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:45)
Show buried residues

Minimal score value
-5.2761
Maximal score value
1.566
Average score
-1.6527
Total score value
-82.6368

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S B 0.3364
2 S B 0.4574
3 L B 1.5660
4 L B 1.1666
5 A B -0.5760
6 E B -2.2125
7 E B -2.3635
8 L B -2.4386
9 E B -4.6511
10 R B -4.9952
11 R B -5.2761
12 R B -5.2051
13 N B -4.4436
14 A B -3.7387
15 E B -4.1019
16 L B -2.4862
17 E B -2.9437
18 A B -1.9910
19 Q B -1.9231
20 L B -1.0362
21 S B -1.3567
22 A B -1.1815
23 A B -1.2730
24 L B -1.4994
25 Q B -2.3751
26 Q B -2.4057
27 D B -2.5721
28 Q B -3.1007
29 Q B -3.1033
30 D B -2.3287
31 G B -1.0737
32 T B -0.3354
33 Y B 0.3779
34 V B 0.6396
35 W B 0.4061
36 Q B -0.7746
37 V B -0.2660
38 D B -2.0327
39 G B -1.8180
40 E B -1.6903
41 V B -0.0926
42 V B 1.1482
43 A B 0.1198
44 R B -1.0371
45 H B -0.9281
46 L B -0.0214
47 V B -1.2139
48 R B -2.5367
49 R B -2.3736
50 A B -1.0820
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Laboratory of Theory of Biopolymers 2018