| Chain sequence(s) |
B: SSLLAEELERRRNAELEAQLSAALQQDQQDGTYVWQVDGEVVARHLVRRA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | 0.3364 | |
| 2 | S | B | 0.4574 | |
| 3 | L | B | 1.5660 | |
| 4 | L | B | 1.1666 | |
| 5 | A | B | -0.5760 | |
| 6 | E | B | -2.2125 | |
| 7 | E | B | -2.3635 | |
| 8 | L | B | -2.4386 | |
| 9 | E | B | -4.6511 | |
| 10 | R | B | -4.9952 | |
| 11 | R | B | -5.2761 | |
| 12 | R | B | -5.2051 | |
| 13 | N | B | -4.4436 | |
| 14 | A | B | -3.7387 | |
| 15 | E | B | -4.1019 | |
| 16 | L | B | -2.4862 | |
| 17 | E | B | -2.9437 | |
| 18 | A | B | -1.9910 | |
| 19 | Q | B | -1.9231 | |
| 20 | L | B | -1.0362 | |
| 21 | S | B | -1.3567 | |
| 22 | A | B | -1.1815 | |
| 23 | A | B | -1.2730 | |
| 24 | L | B | -1.4994 | |
| 25 | Q | B | -2.3751 | |
| 26 | Q | B | -2.4057 | |
| 27 | D | B | -2.5721 | |
| 28 | Q | B | -3.1007 | |
| 29 | Q | B | -3.1033 | |
| 30 | D | B | -2.3287 | |
| 31 | G | B | -1.0737 | |
| 32 | T | B | -0.3354 | |
| 33 | Y | B | 0.3779 | |
| 34 | V | B | 0.6396 | |
| 35 | W | B | 0.4061 | |
| 36 | Q | B | -0.7746 | |
| 37 | V | B | -0.2660 | |
| 38 | D | B | -2.0327 | |
| 39 | G | B | -1.8180 | |
| 40 | E | B | -1.6903 | |
| 41 | V | B | -0.0926 | |
| 42 | V | B | 1.1482 | |
| 43 | A | B | 0.1198 | |
| 44 | R | B | -1.0371 | |
| 45 | H | B | -0.9281 | |
| 46 | L | B | -0.0214 | |
| 47 | V | B | -1.2139 | |
| 48 | R | B | -2.5367 | |
| 49 | R | B | -2.3736 | |
| 50 | A | B | -1.0820 |