Project name: GENTAX_ED

Status: done

Started: 2026-07-16 13:00:54
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Chain sequence(s) A: YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:00)
Show buried residues

Minimal score value
-3.4111
Maximal score value
3.7783
Average score
-0.1332
Total score value
-18.5202

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
552 Y A 0.7965
553 P A -0.6402
554 Q A -2.0256
555 N A -2.2196
556 Q A -1.9702
557 G A -0.6315
558 I A 0.8013
559 T A -0.6927
560 Q A -2.2553
561 E A -3.0216
562 R A -3.2450
563 T A -2.0402
564 C A -1.5312
565 E A -2.8976
566 Q A -2.7363
567 K A -3.0334
568 A A -2.2085
569 S A -2.1866
570 K A -3.0474
571 R A -2.9807
572 P A -1.6370
573 G A -1.1189
574 T A -0.3176
575 V A 0.2700
576 K A -2.0583
577 R A -2.6944
578 P A -1.8099
579 R A -2.1432
580 C A -0.2044
581 W A 0.6327
582 R A -0.0475
583 F A 1.8817
584 S A 1.1333
585 I A 1.9506
586 G A 0.6107
587 S A 0.2628
588 A A 0.6002
589 P A 0.5925
590 L A 1.8082
591 T A 0.9243
592 S A 0.8038
593 I A 1.8834
594 T A 0.1679
595 K A -0.7926
596 I A 0.6903
597 D A -1.1521
598 A A -1.1398
599 Q A -1.3826
600 V A -0.4415
601 R A -2.1752
602 G A -2.0999
603 G A -2.1101
604 E A -2.9388
605 T A -2.5500
606 R A -3.2872
607 Q A -3.1438
608 D A -2.8962
609 Y A -1.3099
610 K A -2.8341
611 D A -3.4111
612 T A -2.2834
613 R A -3.1232
614 R A -1.9141
615 F A 0.6443
616 P A 0.2110
617 L A 0.8810
618 E A -0.9279
619 A A -0.5581
620 P A -0.1329
621 S A 0.4153
622 C A 1.6997
623 A A 1.5142
624 L A 2.0360
625 L A 2.5698
626 F A 2.3255
627 R A -0.2490
628 P A -0.0211
629 C A -0.1864
630 R A -1.3428
631 L A 0.3533
632 P A -0.6468
633 D A -1.6793
634 T A -0.4644
635 C A 0.5934
636 P A 0.2299
637 P A 0.9004
638 F A 1.6277
639 S A 0.6755
640 L A 0.7337
641 R A -1.2082
642 E A -0.8279
643 A A 0.8602
644 W A 0.9487
645 R A -0.3276
646 F A 1.8345
647 L A 2.3885
648 I A 2.3081
649 A A 2.0785
650 H A 1.3427
651 A A 1.4361
652 V A 2.2892
653 G A 1.3787
654 I A 2.5625
655 S A 1.2887
656 V A 1.1848
657 R A -0.8889
658 C A -0.3650
659 R A -1.2494
660 S A -0.0197
661 F A 1.6502
662 A A 0.7717
663 P A 0.9800
664 S A 1.1131
665 W A 1.7203
666 A A 1.5908
667 V A 2.2090
668 C A 1.3422
669 T A 0.1912
670 N A -0.6390
671 P A -0.3681
672 P A 0.0978
673 F A 1.3214
674 S A 0.3291
675 P A 0.1059
676 T A 0.0087
677 A A 0.0616
678 A A 0.2184
679 P A 0.6001
680 Y A 1.5823
681 P A 1.4520
682 V A 2.7940
683 T A 2.6407
684 I A 3.7783
685 V A 3.6434
686 L A 2.8253
687 S A 0.9721
688 P A -0.2591
689 T A -0.9215
690 R A -1.9784
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Laboratory of Theory of Biopolymers 2018