| Chain sequence(s) |
A: YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 552 | Y | A | 0.7965 | |
| 553 | P | A | -0.6402 | |
| 554 | Q | A | -2.0256 | |
| 555 | N | A | -2.2196 | |
| 556 | Q | A | -1.9702 | |
| 557 | G | A | -0.6315 | |
| 558 | I | A | 0.8013 | |
| 559 | T | A | -0.6927 | |
| 560 | Q | A | -2.2553 | |
| 561 | E | A | -3.0216 | |
| 562 | R | A | -3.2450 | |
| 563 | T | A | -2.0402 | |
| 564 | C | A | -1.5312 | |
| 565 | E | A | -2.8976 | |
| 566 | Q | A | -2.7363 | |
| 567 | K | A | -3.0334 | |
| 568 | A | A | -2.2085 | |
| 569 | S | A | -2.1866 | |
| 570 | K | A | -3.0474 | |
| 571 | R | A | -2.9807 | |
| 572 | P | A | -1.6370 | |
| 573 | G | A | -1.1189 | |
| 574 | T | A | -0.3176 | |
| 575 | V | A | 0.2700 | |
| 576 | K | A | -2.0583 | |
| 577 | R | A | -2.6944 | |
| 578 | P | A | -1.8099 | |
| 579 | R | A | -2.1432 | |
| 580 | C | A | -0.2044 | |
| 581 | W | A | 0.6327 | |
| 582 | R | A | -0.0475 | |
| 583 | F | A | 1.8817 | |
| 584 | S | A | 1.1333 | |
| 585 | I | A | 1.9506 | |
| 586 | G | A | 0.6107 | |
| 587 | S | A | 0.2628 | |
| 588 | A | A | 0.6002 | |
| 589 | P | A | 0.5925 | |
| 590 | L | A | 1.8082 | |
| 591 | T | A | 0.9243 | |
| 592 | S | A | 0.8038 | |
| 593 | I | A | 1.8834 | |
| 594 | T | A | 0.1679 | |
| 595 | K | A | -0.7926 | |
| 596 | I | A | 0.6903 | |
| 597 | D | A | -1.1521 | |
| 598 | A | A | -1.1398 | |
| 599 | Q | A | -1.3826 | |
| 600 | V | A | -0.4415 | |
| 601 | R | A | -2.1752 | |
| 602 | G | A | -2.0999 | |
| 603 | G | A | -2.1101 | |
| 604 | E | A | -2.9388 | |
| 605 | T | A | -2.5500 | |
| 606 | R | A | -3.2872 | |
| 607 | Q | A | -3.1438 | |
| 608 | D | A | -2.8962 | |
| 609 | Y | A | -1.3099 | |
| 610 | K | A | -2.8341 | |
| 611 | D | A | -3.4111 | |
| 612 | T | A | -2.2834 | |
| 613 | R | A | -3.1232 | |
| 614 | R | A | -1.9141 | |
| 615 | F | A | 0.6443 | |
| 616 | P | A | 0.2110 | |
| 617 | L | A | 0.8810 | |
| 618 | E | A | -0.9279 | |
| 619 | A | A | -0.5581 | |
| 620 | P | A | -0.1329 | |
| 621 | S | A | 0.4153 | |
| 622 | C | A | 1.6997 | |
| 623 | A | A | 1.5142 | |
| 624 | L | A | 2.0360 | |
| 625 | L | A | 2.5698 | |
| 626 | F | A | 2.3255 | |
| 627 | R | A | -0.2490 | |
| 628 | P | A | -0.0211 | |
| 629 | C | A | -0.1864 | |
| 630 | R | A | -1.3428 | |
| 631 | L | A | 0.3533 | |
| 632 | P | A | -0.6468 | |
| 633 | D | A | -1.6793 | |
| 634 | T | A | -0.4644 | |
| 635 | C | A | 0.5934 | |
| 636 | P | A | 0.2299 | |
| 637 | P | A | 0.9004 | |
| 638 | F | A | 1.6277 | |
| 639 | S | A | 0.6755 | |
| 640 | L | A | 0.7337 | |
| 641 | R | A | -1.2082 | |
| 642 | E | A | -0.8279 | |
| 643 | A | A | 0.8602 | |
| 644 | W | A | 0.9487 | |
| 645 | R | A | -0.3276 | |
| 646 | F | A | 1.8345 | |
| 647 | L | A | 2.3885 | |
| 648 | I | A | 2.3081 | |
| 649 | A | A | 2.0785 | |
| 650 | H | A | 1.3427 | |
| 651 | A | A | 1.4361 | |
| 652 | V | A | 2.2892 | |
| 653 | G | A | 1.3787 | |
| 654 | I | A | 2.5625 | |
| 655 | S | A | 1.2887 | |
| 656 | V | A | 1.1848 | |
| 657 | R | A | -0.8889 | |
| 658 | C | A | -0.3650 | |
| 659 | R | A | -1.2494 | |
| 660 | S | A | -0.0197 | |
| 661 | F | A | 1.6502 | |
| 662 | A | A | 0.7717 | |
| 663 | P | A | 0.9800 | |
| 664 | S | A | 1.1131 | |
| 665 | W | A | 1.7203 | |
| 666 | A | A | 1.5908 | |
| 667 | V | A | 2.2090 | |
| 668 | C | A | 1.3422 | |
| 669 | T | A | 0.1912 | |
| 670 | N | A | -0.6390 | |
| 671 | P | A | -0.3681 | |
| 672 | P | A | 0.0978 | |
| 673 | F | A | 1.3214 | |
| 674 | S | A | 0.3291 | |
| 675 | P | A | 0.1059 | |
| 676 | T | A | 0.0087 | |
| 677 | A | A | 0.0616 | |
| 678 | A | A | 0.2184 | |
| 679 | P | A | 0.6001 | |
| 680 | Y | A | 1.5823 | |
| 681 | P | A | 1.4520 | |
| 682 | V | A | 2.7940 | |
| 683 | T | A | 2.6407 | |
| 684 | I | A | 3.7783 | |
| 685 | V | A | 3.6434 | |
| 686 | L | A | 2.8253 | |
| 687 | S | A | 0.9721 | |
| 688 | P | A | -0.2591 | |
| 689 | T | A | -0.9215 | |
| 690 | R | A | -1.9784 |