Project name: SONAM YADAV

Status: done

Started: 2025-07-01 10:56:31
Settings
Chain sequence(s) A: MKSLLFTLILFILLVQLVSGNWYVRKCANKTGNCRSTCRNGEKAINPPTGMCSKEKLCCVLDDGCSKTIPPGGSSMTSAATGGSTTG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:27)
Show buried residues

Minimal score value
-3.0294
Maximal score value
5.5858
Average score
0.0946
Total score value
8.2336

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8283
2 K A -0.2773
3 S A 0.8117
4 L A 2.1846
5 L A 3.0266
6 F A 3.7196
7 T A 3.3155
8 L A 4.7751
9 I A 5.4000
10 L A 5.0447
11 F A 5.5858
12 I A 5.1515
13 L A 5.0125
14 L A 4.9464
15 V A 3.5759
16 Q A 1.9821
17 L A 3.1340
18 V A 2.9387
19 S A 1.3955
20 G A 0.5338
21 N A -0.1088
22 W A 1.2639
23 Y A 1.1232
24 V A 0.1917
25 R A -1.3276
26 K A -2.4656
27 C A 0.0000
28 A A -1.4286
29 N A -2.4415
30 K A -3.0294
31 T A -1.2850
32 G A 0.0000
33 N A -1.1137
34 C A 0.0000
35 R A -1.1712
36 S A -1.2340
37 T A -1.0320
38 C A -1.2309
39 R A -2.4948
40 N A -2.4332
41 G A -1.9651
42 E A -1.6367
43 K A -1.4399
44 A A -0.5376
45 I A -0.4353
46 N A -1.3046
47 P A -0.9582
48 P A -0.4175
49 T A -0.8273
50 G A -0.6069
51 M A 0.2874
52 C A -0.8675
53 S A -1.5204
54 K A -2.5685
55 E A -2.9272
56 K A -1.9399
57 L A -0.6853
58 C A 0.0000
59 C A 0.0000
60 V A -0.4920
61 L A -0.4535
62 D A -2.1212
63 D A -2.2405
64 G A -1.5574
65 C A -0.9179
66 S A -1.2296
67 K A -1.1856
68 T A 0.0256
69 I A 1.2538
70 P A 0.1597
71 P A -0.2461
72 G A -0.6939
73 G A -0.8290
74 S A -0.4675
75 S A 0.0517
76 M A 0.7621
77 T A 0.2782
78 S A 0.0237
79 A A -0.0085
80 A A -0.2041
81 T A -0.4140
82 G A -0.7651
83 G A -0.8337
84 S A -0.6687
85 T A -0.4856
86 T A -0.4753
87 G A -0.5490
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Laboratory of Theory of Biopolymers 2018