Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKVSGFTLTELSIHWVRQAPGKGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELTSLRSEDTAVYYCSTIFGVVTNFDNWGQGTLVTVSS
L: DIQMTQSPSSLSASAGDRVTITCRASQAIRNDLGWYQQKPGKAPKRLIYAAFNLQSGVPSRFSGSGSGTEFTLTISSLQPEDLASYYCQQYNRYPWTFGQGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:22) [INFO] Main: Simulation completed successfully. (00:02:24) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4162 | |
2 | V | H | -0.9226 | |
3 | Q | H | -1.2014 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.6075 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.3860 | |
8 | G | H | -0.4283 | |
9 | A | H | 0.2694 | |
11 | E | H | 0.1573 | |
12 | V | H | 1.0155 | |
13 | K | H | -0.8808 | |
14 | K | H | -2.0713 | |
15 | P | H | -1.8257 | |
16 | G | H | -1.4086 | |
17 | A | H | -1.0980 | |
18 | S | H | -1.2043 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.8435 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.3696 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.6065 | |
25 | V | H | 0.0000 | |
26 | S | H | -0.7351 | |
27 | G | H | -0.9739 | |
28 | F | H | -0.7025 | |
29 | T | H | -0.6323 | |
30 | L | H | 0.0000 | |
35 | T | H | -1.0771 | |
36 | E | H | -1.5104 | |
37 | L | H | -0.0238 | |
38 | S | H | 0.0000 | |
39 | I | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.6448 | |
45 | A | H | -1.0660 | |
46 | P | H | -0.9235 | |
47 | G | H | -1.5266 | |
48 | K | H | -2.3298 | |
49 | G | H | -1.5450 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.9647 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | G | H | 0.0000 | |
56 | F | H | -0.6353 | |
57 | D | H | -1.4513 | |
58 | P | H | -2.0597 | |
59 | E | H | -2.9159 | |
62 | D | H | -3.4948 | |
63 | G | H | -2.6434 | |
64 | E | H | -2.7783 | |
65 | T | H | -0.8915 | |
66 | I | H | -0.3994 | |
67 | Y | H | -0.6993 | |
68 | A | H | 0.0000 | |
69 | Q | H | -2.5996 | |
70 | K | H | -2.6883 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.2077 | |
74 | G | H | -1.5460 | |
75 | R | H | -1.3796 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.6047 | |
78 | M | H | 0.0000 | |
79 | T | H | -0.2582 | |
80 | E | H | -0.7206 | |
81 | D | H | -1.0248 | |
82 | T | H | -0.7329 | |
83 | S | H | -0.6036 | |
84 | T | H | -0.7248 | |
85 | D | H | -0.9464 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.4118 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.1474 | |
91 | L | H | 0.0000 | |
92 | T | H | -0.9182 | |
93 | S | H | -1.0007 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.4053 | |
96 | S | H | -2.0362 | |
97 | E | H | -2.3041 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.6163 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.3935 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | S | H | 0.0000 | |
106 | T | H | 0.0000 | |
107 | I | H | 0.0000 | |
108 | F | H | 2.0852 | |
109 | G | H | 1.3271 | |
110 | V | H | 2.0767 | |
112 | V | H | 1.9232 | |
113 | T | H | 1.1671 | |
114 | N | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.1606 | |
117 | N | H | -0.5134 | |
118 | W | H | -0.6249 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.2982 | |
121 | G | H | -0.4989 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.8381 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0293 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.9644 | |
128 | S | H | -0.9675 | |
1 | D | L | -2.4571 | |
2 | I | L | 0.0000 | |
3 | Q | L | -2.2426 | |
4 | M | L | 0.0000 | |
5 | T | L | -1.4231 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.7815 | |
8 | P | L | -0.6535 | |
9 | S | L | -0.9060 | |
10 | S | L | -0.9828 | |
11 | L | L | -0.6715 | |
12 | S | L | -0.8972 | |
13 | A | L | 0.0000 | |
14 | S | L | -1.1294 | |
15 | A | L | -1.0816 | |
16 | G | L | -1.1947 | |
17 | D | L | -1.8930 | |
18 | R | L | -2.2755 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.5887 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.7495 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.5415 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.7210 | |
27 | Q | L | -1.8656 | |
28 | A | L | -1.4004 | |
29 | I | L | 0.0000 | |
36 | R | L | -2.4771 | |
37 | N | L | -1.4319 | |
38 | D | L | 0.0000 | |
39 | L | L | 0.0000 | |
40 | G | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | -0.8135 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.8273 | |
46 | P | L | -1.3268 | |
47 | G | L | -1.7337 | |
48 | K | L | -2.5378 | |
49 | A | L | -1.5602 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.2389 | |
52 | R | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.9338 | |
56 | A | L | 0.3587 | |
57 | A | L | 0.0000 | |
65 | F | L | 1.7512 | |
66 | N | L | 0.9456 | |
67 | L | L | 0.7910 | |
68 | Q | L | 0.0132 | |
69 | S | L | -0.4078 | |
70 | G | L | -0.5001 | |
71 | V | L | -0.2956 | |
72 | P | L | -0.3554 | |
74 | S | L | -0.4079 | |
75 | R | L | -0.7919 | |
76 | F | L | 0.0000 | |
77 | S | L | 0.1875 | |
78 | G | L | 0.7029 | |
79 | S | L | 0.0747 | |
80 | G | L | -0.8422 | |
83 | S | L | -1.3312 | |
84 | G | L | -1.6646 | |
85 | T | L | -1.7021 | |
86 | E | L | -1.8732 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.3838 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.5921 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.2372 | |
93 | S | L | -1.3295 | |
94 | L | L | 0.0000 | |
95 | Q | L | -1.0950 | |
96 | P | L | -1.1214 | |
97 | E | L | -1.9046 | |
98 | D | L | 0.0000 | |
99 | L | L | -0.7986 | |
100 | A | L | 0.0000 | |
101 | S | L | -1.1056 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 0.0000 | |
108 | N | L | -0.8577 | |
109 | R | L | -1.2877 | |
114 | Y | L | -0.5745 | |
115 | P | L | -0.8347 | |
116 | W | L | 0.0000 | |
117 | T | L | -0.8172 | |
118 | F | L | -0.4149 | |
119 | G | L | 0.0000 | |
120 | Q | L | -1.6515 | |
121 | G | L | -1.2899 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.7115 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.1073 | |
126 | I | L | -0.1269 | |
127 | K | L | -1.4321 |