| Chain sequence(s) |
A: GGGHKFG
C: GGGHKFG B: GGGHKFG E: GGGHKFG D: GGGHKFG G: GGGHKFG F: GGGHKFG I: GGGHKFG H: GGGHKFG K: GGGHKFG J: GGGHKFG M: GGGHKFG L: GGGHKFG O: GGGHKFG N: GGGHKFG Q: GGGHKFG P: GGGHKFG S: GGGHKFG R: GGGHKFG T: GGGHKFG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:06)
[INFO] Main: Simulation completed successfully. (00:04:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.9766 | |
| 2 | G | A | -1.6244 | |
| 3 | G | A | -1.6025 | |
| 4 | H | A | -1.8529 | |
| 5 | K | A | -1.4665 | |
| 6 | F | A | 0.5195 | |
| 7 | G | A | -0.1509 | |
| 1 | G | B | -1.7650 | |
| 2 | G | B | -1.6754 | |
| 3 | G | B | -1.7248 | |
| 4 | H | B | -1.6030 | |
| 5 | K | B | -1.7516 | |
| 6 | F | B | -0.2073 | |
| 7 | G | B | -0.5839 | |
| 1 | G | C | -1.3592 | |
| 2 | G | C | -1.5203 | |
| 3 | G | C | 0.0000 | |
| 4 | H | C | -0.6313 | |
| 5 | K | C | -0.0071 | |
| 6 | F | C | 1.2873 | |
| 7 | G | C | 0.4806 | |
| 1 | G | D | -1.3574 | |
| 2 | G | D | -1.4799 | |
| 3 | G | D | -1.2779 | |
| 4 | H | D | -0.5236 | |
| 5 | K | D | -0.4774 | |
| 6 | F | D | 1.3306 | |
| 7 | G | D | 0.2654 | |
| 1 | G | E | -1.5271 | |
| 2 | G | E | -1.5798 | |
| 3 | G | E | -1.7582 | |
| 4 | H | E | -1.1498 | |
| 5 | K | E | -1.1913 | |
| 6 | F | E | 0.8129 | |
| 7 | G | E | -0.1038 | |
| 1 | G | F | -1.6415 | |
| 2 | G | F | 0.0000 | |
| 3 | G | F | -1.7248 | |
| 4 | H | F | -1.4993 | |
| 5 | K | F | -1.0627 | |
| 6 | F | F | 0.8603 | |
| 7 | G | F | -0.0661 | |
| 1 | G | G | -1.6236 | |
| 2 | G | G | 0.0000 | |
| 3 | G | G | -1.9097 | |
| 4 | H | G | -1.4682 | |
| 5 | K | G | -1.2568 | |
| 6 | F | G | 0.7284 | |
| 7 | G | G | -0.1532 | |
| 1 | G | H | -1.5312 | |
| 2 | G | H | 0.0000 | |
| 3 | G | H | -1.8294 | |
| 4 | H | H | -1.2274 | |
| 5 | K | H | -1.5140 | |
| 6 | F | H | 0.7197 | |
| 7 | G | H | -0.1288 | |
| 1 | G | I | -1.3852 | |
| 2 | G | I | -1.5794 | |
| 3 | G | I | -1.7830 | |
| 4 | H | I | -1.1906 | |
| 5 | K | I | -1.4816 | |
| 6 | F | I | 0.7381 | |
| 7 | G | I | -0.1122 | |
| 1 | G | J | -1.3374 | |
| 2 | G | J | -1.5918 | |
| 3 | G | J | -1.7089 | |
| 4 | H | J | -1.2912 | |
| 5 | K | J | -1.5938 | |
| 6 | F | J | 0.7043 | |
| 7 | G | J | -0.1107 | |
| 1 | G | K | -1.3178 | |
| 2 | G | K | 0.0000 | |
| 3 | G | K | -1.7601 | |
| 4 | H | K | -1.2500 | |
| 5 | K | K | -1.5498 | |
| 6 | F | K | 0.7146 | |
| 7 | G | K | -0.0983 | |
| 1 | G | L | -1.2909 | |
| 2 | G | L | -1.5960 | |
| 3 | G | L | -1.7503 | |
| 4 | H | L | -1.1663 | |
| 5 | K | L | -1.4419 | |
| 6 | F | L | 0.7772 | |
| 7 | G | L | -0.0539 | |
| 1 | G | M | -1.4004 | |
| 2 | G | M | -1.6836 | |
| 3 | G | M | -1.8271 | |
| 4 | H | M | -1.2273 | |
| 5 | K | M | -1.4813 | |
| 6 | F | M | 0.7331 | |
| 7 | G | M | -0.0654 | |
| 1 | G | N | -1.4333 | |
| 2 | G | N | -1.6882 | |
| 3 | G | N | -1.8372 | |
| 4 | H | N | -1.2869 | |
| 5 | K | N | -1.5585 | |
| 6 | F | N | 0.6442 | |
| 7 | G | N | -0.1357 | |
| 1 | G | O | -1.4493 | |
| 2 | G | O | -1.6930 | |
| 3 | G | O | -1.8403 | |
| 4 | H | O | -1.5863 | |
| 5 | K | O | -1.6792 | |
| 6 | F | O | 0.4811 | |
| 7 | G | O | -0.2747 | |
| 1 | G | P | -1.3898 | |
| 2 | G | P | -1.6564 | |
| 3 | G | P | -1.9025 | |
| 4 | H | P | -1.4802 | |
| 5 | K | P | -1.9415 | |
| 6 | F | P | -0.2521 | |
| 7 | G | P | -0.6102 | |
| 1 | G | Q | -1.2438 | |
| 2 | G | Q | -1.5944 | |
| 3 | G | Q | -1.7768 | |
| 4 | H | Q | -1.2131 | |
| 5 | K | Q | -1.5943 | |
| 6 | F | Q | 0.4557 | |
| 7 | G | Q | -0.3357 | |
| 1 | G | R | -1.2254 | |
| 2 | G | R | -1.6314 | |
| 3 | G | R | -1.6661 | |
| 4 | H | R | -1.2164 | |
| 5 | K | R | -1.3350 | |
| 6 | F | R | 0.7174 | |
| 7 | G | R | -0.0460 | |
| 1 | G | S | -1.4288 | |
| 2 | G | S | -1.5357 | |
| 3 | G | S | -1.6471 | |
| 4 | H | S | -1.2005 | |
| 5 | K | S | -1.2614 | |
| 6 | F | S | 0.9195 | |
| 7 | G | S | 0.1276 | |
| 1 | G | T | -1.5254 | |
| 2 | G | T | 0.0000 | |
| 3 | G | T | 0.0000 | |
| 4 | H | T | -0.9578 | |
| 5 | K | T | -0.1315 | |
| 6 | F | T | 1.2813 | |
| 7 | G | T | 0.2256 |