| Chain sequence(s) |
A: MIPRGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVLALSFNNYHWHSTNYYIKVRAGDNKYMHLKVFNGPKLRHDKLTHADRVLTGYQVDKNKDDELTGF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:11)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.6532 | |
| 2 | I | A | 1.7493 | |
| 3 | P | A | 0.2330 | |
| 4 | R | A | -1.1877 | |
| 5 | G | A | -1.1371 | |
| 6 | L | A | -0.9149 | |
| 7 | S | A | -1.2764 | |
| 8 | E | A | -2.1993 | |
| 9 | A | A | -1.8080 | |
| 10 | K | A | -1.6300 | |
| 11 | P | A | -1.0166 | |
| 12 | A | A | -0.9854 | |
| 13 | T | A | -1.2894 | |
| 14 | P | A | -1.7647 | |
| 15 | E | A | -2.8130 | |
| 16 | I | A | 0.0000 | |
| 17 | Q | A | -2.6657 | |
| 18 | E | A | -3.6181 | |
| 19 | I | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | D | A | -3.5724 | |
| 22 | K | A | -3.2698 | |
| 23 | V | A | 0.0000 | |
| 24 | K | A | -2.4292 | |
| 25 | P | A | -2.1840 | |
| 26 | Q | A | -2.0533 | |
| 27 | L | A | 0.0000 | |
| 28 | E | A | -2.9913 | |
| 29 | E | A | -3.6487 | |
| 30 | K | A | -3.1056 | |
| 31 | T | A | -2.4915 | |
| 32 | N | A | -3.3686 | |
| 33 | E | A | -3.2389 | |
| 34 | T | A | -1.9692 | |
| 35 | Y | A | 0.0000 | |
| 36 | G | A | -1.7867 | |
| 37 | K | A | -2.5981 | |
| 38 | L | A | 0.0000 | |
| 39 | E | A | -2.0374 | |
| 40 | A | A | -1.5597 | |
| 41 | V | A | -0.6736 | |
| 42 | Q | A | -1.5582 | |
| 43 | Y | A | 0.0000 | |
| 44 | K | A | -1.0379 | |
| 45 | T | A | -0.5812 | |
| 46 | Q | A | -0.4520 | |
| 47 | V | A | 0.1496 | |
| 48 | L | A | 0.1139 | |
| 49 | A | A | 0.0878 | |
| 50 | L | A | 0.9155 | |
| 51 | S | A | 0.1983 | |
| 52 | F | A | 0.6940 | |
| 53 | N | A | -1.0317 | |
| 54 | N | A | -1.1392 | |
| 55 | Y | A | 0.2269 | |
| 56 | H | A | -0.5655 | |
| 57 | W | A | 0.0325 | |
| 58 | H | A | -0.6149 | |
| 59 | S | A | 0.0000 | |
| 60 | T | A | 0.0000 | |
| 61 | N | A | -0.0379 | |
| 62 | Y | A | -0.0289 | |
| 63 | Y | A | 0.0000 | |
| 64 | I | A | 0.0000 | |
| 65 | K | A | 0.0000 | |
| 66 | V | A | 0.0000 | |
| 67 | R | A | -2.6822 | |
| 68 | A | A | -2.1815 | |
| 69 | G | A | -2.4501 | |
| 70 | D | A | -2.8547 | |
| 71 | N | A | -3.4888 | |
| 72 | K | A | -3.1387 | |
| 73 | Y | A | 0.0000 | |
| 74 | M | A | 0.0000 | |
| 75 | H | A | 0.0000 | |
| 76 | L | A | 0.0000 | |
| 77 | K | A | -0.0851 | |
| 78 | V | A | 0.0000 | |
| 79 | F | A | -0.3934 | |
| 80 | N | A | -1.2306 | |
| 81 | G | A | -1.0504 | |
| 82 | P | A | -1.1904 | |
| 83 | K | A | -1.3264 | |
| 84 | L | A | -0.8709 | |
| 85 | R | A | -2.7161 | |
| 86 | H | A | -2.8718 | |
| 87 | D | A | -3.1378 | |
| 88 | K | A | -2.8987 | |
| 89 | L | A | -1.0590 | |
| 90 | T | A | -1.4810 | |
| 91 | H | A | -1.6824 | |
| 92 | A | A | -1.5732 | |
| 93 | D | A | -2.5857 | |
| 94 | R | A | -1.6606 | |
| 95 | V | A | -0.5564 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | -0.0010 | |
| 98 | G | A | 0.0796 | |
| 99 | Y | A | 0.2404 | |
| 100 | Q | A | -0.3571 | |
| 101 | V | A | -0.6905 | |
| 102 | D | A | -2.3973 | |
| 103 | K | A | -3.1491 | |
| 104 | N | A | -3.7839 | |
| 105 | K | A | -4.0243 | |
| 106 | D | A | -3.7052 | |
| 107 | D | A | -3.4638 | |
| 108 | E | A | -3.1484 | |
| 109 | L | A | 0.0000 | |
| 110 | T | A | -0.5857 | |
| 111 | G | A | -0.1593 | |
| 112 | F | A | 0.8557 |